Cynara cardunculus var. scolymus (artichoke): 112512459
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Entry
112512459 CDS
T05604
Name
(RefSeq) tubby-like F-box protein 3 isoform X1
KO
K19600
tubby and related proteins
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccav03037
]
112512459
04990 Domain-containing proteins not elsewhere classified [BR:
ccav04990
]
112512459
Cilium and associated proteins [BR:
ccav03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112512459
Domain-containing proteins not elsewhere classified [BR:
ccav04990
]
Other domain-containing proteins
Tubby family proteins
112512459
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
DUF3527
Motif
Other DBs
NCBI-GeneID:
112512459
NCBI-ProteinID:
XP_024974202
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Position
LG 5:316407..322847
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AA seq
405 aa
AA seq
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MSFKSMLQDMKGEFGSISRKGFGSRSRSRSQQMVGDRSAAAIVDALKQSCWANMPPELLR
DVLMRIEASESTWPDRKNVVSCGGVCRNWREIMKEIVKNPEXSGKLTFPISLKQPGSRGS
LIQCFIKRNRSAQTYHLYQSLDQGVDEGKFLLTAKRCRRATCTDYIISLNAEDVSKGSNT
YIGKLRSNFLGTKFTVYDAQPPNAGALATKCHSFRPGSMKRVSPRVPAGNYPVSHISYEL
NVLGSRHRGPRRMHCVMNAIPTSAVEPGGVAPTQTEFLLSNVDSFSSLPFFRSKSARVDN
SQLGSSLFAQKDAMLTLKNKAPRWHEQLQCWCLNFNGRVTVASVKNFQLVASVENGGGGQ
EHENVILQFGKVGKDAFTMDYQYPISAFQAFAICLSSFDTKIACE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaagagtatgcttcaggatatgaagggcgaatttgggagcatttctagaaaa
ggatttggatcgaggtcgaggtcgaggtcacagcaaatggtcggagatagatctgcggcg
gccattgttgatgctttgaagcagagttgttgggcgaacatgccgccggagctattacgg
gatgtgttgatgaggattgaggcatcggagagtacttggcctgatcggaagaatgtggtt
tcttgtggtggtgtttgcaggaattggagagaaattatgaaagaaatcgtgaagaatcca
gaatkttctggcaaattaactttccccatttcgctgaagcagcctggttcaaggggctct
ttaatacaatgctttataaagcggaatcggagcgcgcaaacgtatcatctctaccaaagt
ctggatcaaggtgttgacgaggggaagttccttctcactgcaaaaaggtgtagacgcgct
acatgcacggattatataatttctctaaatgcggaagacgtgtcaaaagggagcaatact
tacataggaaagttaagatcaaacttccttgggacaaaattcacagtctatgatgcacaa
cctccaaatgctggagctttggcaacaaaatgccattccttcagaccagggagtatgaaa
cgagtgtctcccagagttcctgccggaaactacccagtttcccacatttcgtatgagctg
aacgtcttgggatccagacacaggggtccaagaaggatgcattgtgtcatgaatgcaatc
cctacaagtgccgttgagccaggaggagttgctcctactcaaaccgagttcctgcttagc
aacgtggattccttttcgtctctcccctttttcagatcaaaatccgcacgagtcgataat
tcccaattgggatcatcattatttgctcagaaggacgcgatgttgacgttgaagaacaag
gcacctaggtggcatgagcaactccaatgctggtgtctcaacttcaatgggcgggtgacc
gttgcttcagtgaaaaactttcagctggttgcttcygtggagaatggaggtggaggtcag
gaacacgaaaacgtgattcttcagtttggaaaagttggaaaagatgcgttcacgatggac
tatcaatacccgatatcggcctttcaggcgtttgcgatctgtcttagcagctttgacacc
aaaattgcctgtgaatga
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