Cynara cardunculus var. scolymus (artichoke): 112512484
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Entry
112512484 CDS
T05604
Name
(RefSeq) elongation factor Tu, mitochondrial
KO
K02358
elongation factor Tu
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
112512484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ccav03012
]
112512484
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112512484
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112512484
Translation factors [BR:
ccav03012
]
Eukaryotic type
Elongation factors
112512484
Prokaryotic type
112512484
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
112512484
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112512484
Exosomal proteins of breast cancer cells
112512484
Exosomal proteins of colorectal cancer cells
112512484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
Ribosomal_S8
GTP-eEF1A_C
Motif
Other DBs
NCBI-GeneID:
112512484
NCBI-ProteinID:
XP_024974240
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All DBs
Position
LG_5
Genome browser
AA seq
451 aa
AA seq
DB search
MASIAFRNSNSRHLFRLSPQLRSGCRGSVXSASGFPTIESFSGNDNAVAPNXWWRSMATF
TRTKPHVNVGTIGHVDHGKTTLTAAITKVLADEGKAKAIAFDEIDKAPEEKKRGITIATA
HVEYETTKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQV
GVPSLVCFLNKVDAVDDPELLELVELELRELLSFYKFPGDEIPIVRGSALSALQGTNDEI
GKNAILKLMEAVDDYIPTPERQKEKAFLMPIEDVFSIAGRGTVATGRVEQGTIKVGEEVE
IMGLMQGSKKTTVTGVEMFKKSLDHGEAGDNVGLLLRGISRTDIQRGQVIAKPGSVKTYT
KFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADVTGKVDLPESVKMVMPGDNVTAAFEL
ITPVVLEPGQRFALREGGRTVGAGVVSKVIS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctattgccttcagaaactctaattccagacatctatttagactatctcctcaa
ttacgctccggttgtcgaggatccgtcgyatcagcttctggtttcccaaccattgagtca
ttttctggaaatgataacgccgtagctcctaatycatggtggagatccatggccactttt
acacgaacaaaacctcatgttaatgttggaacaattggacacgttgatcatggaaagacg
acacttacggctgcaatcacaaaggtactggccgatgaagggaaggcgaaggctattgcc
tttgatgaaatcgataaggctcctgaagagaaaaagagaggaatcacaattgcgacggct
catgtggaatatgaaaccactaaaaggcattacgctcatgtggaytgtcctggacacgct
gattatgttaaaaacatgatcactggagctgctcaaatggacgggggaattctggtggtc
tctgcacctgatggacccatgccacaaacaaaagagcatatccttcttgcacgacaggtg
ggtgtgccatcactcgtgtgttttctgaataaagttgatgcggttgacgatcccgagtta
ctagaactcgtggaactagagcttcgagagcttcttagcttctacaagtttccgggggat
gaaattcccattgtacgaggttcagctttatcggctttacaaggcactaatgatgaaatt
ggaaaaaatgccattctaaagttgatggaagctgtagatgattacattcctacacctgaa
cgccaaaaggagaaggcatttttaatgccgattgaagacgttttctcaattgcggggcgt
ggtactgttgccactggtcgtgttgaacaagggacgattaaagttggggaggaagttgag
attatggggttgatgcagggttcgaaaaaaactacggttactggtgttgagatgttcaaa
aagagtttagatcatggagaagctggtgataatgtcggtctccttttgcgtggtataagt
agaactgatatccagcgaggacaggtgattgcaaagcctggtagtgtaaaaacgtacacr
aagtttgaggctgaaatctacgttcttacaaaggatgaaggtggtcgtcatactgccttc
ttttcaaactacagacctcagttttatttgaggacggcggatgtcactgggaaagtggat
ttgcctgaaagcgtaaagatggttatgcctggggacaatgtcactgctgctttcgaacta
atcacgccagttgttcttgaaccaggccaaagatttgcccttcgggaaggaggccgaacg
gtgggtgcaggagtagtttcaaaggtgataagctga
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