KEGG   Cynara cardunculus var. scolymus (artichoke): 112512573
Entry
112512573         CDS       T05604                                 
Name
(RefSeq) glycine-rich RNA-binding protein 2, mitochondrial-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112512573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112512573
   03041 Spliceosome [BR:ccav03041]
    112512573
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     112512573
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112512573
Spliceosome [BR:ccav03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    112512573
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5
Other DBs
NCBI-GeneID: 112512573
NCBI-ProteinID: XP_024974381
LinkDB
Position
LG 5:35262166..35266398
AA seq 304 aa
MSFQSWDSKFVFCLSCVPNAPFVGKLSSHFSQAGGFHVNGSSTSRAVCIHPTTNPTFWSI
LKMAFLGRVGNLLKQSGSKHASIGLSSTNSPLFKAIRSMSSAKLFVGGLSYGTDEMGLRE
AFQQYGEVIDAKVITDRDSGRSRGFGFVSYTSADAANTALQDMDGKELHGRRIRVNFAQE
RPRPSFGGGGGYGGAGYGGGGAGYGGYGGAGVGGGGYGGAGGYSGGYSGGGYVGGGGYSG
GGYGGGSINNAGEYGSGNHNAASGNDPFNGVVEQEPLAGGGGDGDGNLNHRDYEDDDYAN
TSNK
NT seq 915 nt   +upstreamnt  +downstreamnt
atgtcgttccaatcatgggacagcaaatttgtgttctgtctttcttgtgtaccaaatgca
ccatttgttggcaagctctcttcacatttttcacaagctgggggttttcacgtaaatggc
agctctacttctagagcagtctgcatacatcccactaccaaccccacattctggtccatt
ctcaaaatggcgtttcttggtagagttggcaatctgcttaaacagtcaggaagcaagcat
gccagtattggattatcttccacaaattcaccactttttaaggcaatcagaagcatgtca
tctgctaagctctttgttggaggactttcatatggaactgatgaaatgggattaagagaa
gcttttcagcaatacggggaagtgatagatgccaaagttatcacggatcgtgattctggt
aggtctcgaggttttggctttgttagttatacatcagctgatgcagctaacactgctctt
caggacatggatggcaaggaactccatggtcgaaggattagagtcaactttgcccaagag
agacctcgtccatccttcggtggtggtggtggatacggcggtgctggttacggcggaggt
ggtgctggttatggcggctacggaggtgctggtgttggtggaggcggttatggaggagct
ggtgggtacagtggtgggtacagtggtggcggctatgtaggtggcggtgggtatagtggc
ggtggctatggtggcggcagcatcaacaatgcaggtgagtatggcagcgggaatcataat
gctgccagtgggaatgatccctttaacggtgttgttgagcaagaaccgttagctggtggt
ggtggtgatggtgatggcaatctgaaccatcgtgattatgaagacgatgattatgccaac
acatccaacaagtaa

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