Cynara cardunculus var. scolymus (artichoke): 112512586
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Entry
112512586 CDS
T05604
Name
(RefSeq) transcription factor MYB48-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112512586
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112512586
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SR-25
Motif
Other DBs
NCBI-GeneID:
112512586
NCBI-ProteinID:
XP_024974398
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Position
LG 5:5699194..5700730
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AA seq
257 aa
AA seq
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MRHVEDESIRKGPWTEHEDVQLVFYVNTFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHP
GLKRGRMTPHEERLVLEYHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQESKRGS
SPSSSFSNSSSSSSFCTNDPIVDSMPMTETKERSFYDTGGIEMVPNSRPKNNTTLMKYAK
DDSEEHEGIYSMDEIWKDIDLLEIDDGMKPVFDPYSEIMPSHIWDYSSINSFWTTDSGQE
EFSTYMAFPATSERLLG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatgtagaagatgaaagcataagaaaagggccatggactgaacatgaagatgtt
cagttggttttttacgtgaacacctttggcgatcgtcgatgggatttcatagcaaaagtt
tcaggtttaaatcgaaccggaaaaagttgcagactcagatgggtcaattatctgcaccct
ggcttgaaaagagggaggatgactcctcatgaagaaaggcttgttcttgaataccattct
aaatggggaaatagatggtcaagaattgcaagaaagttgcctgggcgcaccgataacgag
atcaagaattattggaggacccatatgaggaaaaaggcgcaagaaagcaaaagggggtcg
tctccatcttcatccttctccaacagctcttcctcctcatcgttttgtaccaacgatccc
atcgttgattcgatgcccatgactgaaactaaagaaagaagcttctatgacactggagga
atcgaaatggtgccaaattctagacccaaaaacaacaccaccttaatgaagtatgctaaa
gatgatagtgaagaacacgaagggatttattcgatggatgagatatggaaagacatcgat
ttattagaaattgatgatggtatgaaaccggtttttgatccttatagtgagattatgcct
tctcatatatgggattactcttcgatcaacagtttttggaccacggatagtggtcaggaa
gagttcagtacatatatggctttcccggcaacaagcgagcgattacttggctga
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