Cynara cardunculus var. scolymus (artichoke): 112512655
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Entry
112512655 CDS
T05604
Name
(RefSeq) UPF0183 protein At3g51130
KO
K27411
phagosome assembly factor 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112512655
Membrane trafficking [BR:
ccav04131
]
Autophagy
Other autophagy associated proteins
Others
112512655
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Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
112512655
NCBI-ProteinID:
XP_024974493
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Position
LG 5:complement(29909396..29917261)
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AA seq
404 aa
AA seq
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MLQRPRRRCEGTAMGVIVLDLRPGLGIGPFSLGMPICEAFAQIEHQPNIYDVVHVKYFDE
DPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSTPATFVAVY
AVFGPTFPGIYDKDRGVYTLFYPGLSFAFPIPSQYTDCCHNGEAELPLEFPDGTTPVTCR
VCIYDSSTDSKVGVGSLMNKASAPPLPAGSLYMEEVHVKLGEELWFTVGGQHIPFGASPQ
DVWTELGRPDGIHQKQVDQMVIHSASDPRPKTTLCGDYFYNYFGRGFDILFDGQTHKIKK
FVLHTNYPGHADFNSYMKCNFIIHATEFDGAFHQDMNSSKSRITPGSKWDQVKEILGDCG
RAAIQTQGSTSNPFGSTFVYGYQNVAFEVMKNGYIATVTLFQSY
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagagaccccgtagaaggtgtgagggcaccgccatgggtgtcatcgttcttgat
cttcgtcccggccttggaattggtcccttttctctaggaatgcctatatgtgaagcgttt
gcacagatagagcaccaacctaacatctacgatgttgttcatgtgaagtactttgatgag
gatccactaaagttggatattgttataagctttccagaccatggctttcatcttcgtttt
gatccatggtctcagaggcttcgacttattgaaatttttgatgtcaaacggcttcaaatg
cgctatgcaacatcactgataggaggtccgtcaactccagctactttcgtagctgtatat
gccgtttttgggccaacatttcctggaatttatgacaaagatagaggtgtttatactctc
ttctatccggggctatcatttgcttttcccattccctctcagtataccgactgctgccat
aatggggaagcggaattgcccttggagtttccggatggcactactcctgtaacatgtcgt
gtatgcatatacgacagttcgacagatagtaaagttggtgtaggatcattgatgaacaag
gcttctgctcctccgcttcctgctggtagcctctacatggaagaagtccatgttaagcta
ggggaggaattatggtttactgtaggtggccagcatatcccttttggtgcttcgccacag
gatgtgtggacagaattaggccgaccagatggaattcatcaaaaacaggtcgaccaaatg
gtaattcactctgcttcagacccacgaccaaaaacaaccctatgtggtgattacttctac
aactattttggtcgaggatttgacatattgtttgacggccagacccacaagatcaaaaag
tttgttctacatacaaattatccggggcatgccgacttcaattcatacatgaagtgcaat
ttcattatccatgctacagaatttgatggtgcatttcatcaagatatgaattcctcaaaa
agtaggattacgcccgggtcaaagtgggaccaagtgaaggagatcctcggagattgtggc
cgagctgctattcaaacacaaggctctacaagcaatccatttggctccacttttgtctat
gggtaccagaatgttgcttttgaggtcatgaagaatggctatattgctaccgtgactctt
ttccaatcatactaa
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