KEGG   Cynara cardunculus var. scolymus (artichoke): 112512655
Entry
112512655         CDS       T05604                                 
Name
(RefSeq) UPF0183 protein At3g51130
  KO
K27411  phagosome assembly factor 1
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112512655
Membrane trafficking [BR:ccav04131]
 Autophagy
  Other autophagy associated proteins
   Others
    112512655
SSDB
Motif
Pfam: PHAF1
Other DBs
NCBI-GeneID: 112512655
NCBI-ProteinID: XP_024974493
LinkDB
Position
LG 5:complement(29909396..29917261)
AA seq 404 aa
MLQRPRRRCEGTAMGVIVLDLRPGLGIGPFSLGMPICEAFAQIEHQPNIYDVVHVKYFDE
DPLKLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATSLIGGPSTPATFVAVY
AVFGPTFPGIYDKDRGVYTLFYPGLSFAFPIPSQYTDCCHNGEAELPLEFPDGTTPVTCR
VCIYDSSTDSKVGVGSLMNKASAPPLPAGSLYMEEVHVKLGEELWFTVGGQHIPFGASPQ
DVWTELGRPDGIHQKQVDQMVIHSASDPRPKTTLCGDYFYNYFGRGFDILFDGQTHKIKK
FVLHTNYPGHADFNSYMKCNFIIHATEFDGAFHQDMNSSKSRITPGSKWDQVKEILGDCG
RAAIQTQGSTSNPFGSTFVYGYQNVAFEVMKNGYIATVTLFQSY
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgttgcagagaccccgtagaaggtgtgagggcaccgccatgggtgtcatcgttcttgat
cttcgtcccggccttggaattggtcccttttctctaggaatgcctatatgtgaagcgttt
gcacagatagagcaccaacctaacatctacgatgttgttcatgtgaagtactttgatgag
gatccactaaagttggatattgttataagctttccagaccatggctttcatcttcgtttt
gatccatggtctcagaggcttcgacttattgaaatttttgatgtcaaacggcttcaaatg
cgctatgcaacatcactgataggaggtccgtcaactccagctactttcgtagctgtatat
gccgtttttgggccaacatttcctggaatttatgacaaagatagaggtgtttatactctc
ttctatccggggctatcatttgcttttcccattccctctcagtataccgactgctgccat
aatggggaagcggaattgcccttggagtttccggatggcactactcctgtaacatgtcgt
gtatgcatatacgacagttcgacagatagtaaagttggtgtaggatcattgatgaacaag
gcttctgctcctccgcttcctgctggtagcctctacatggaagaagtccatgttaagcta
ggggaggaattatggtttactgtaggtggccagcatatcccttttggtgcttcgccacag
gatgtgtggacagaattaggccgaccagatggaattcatcaaaaacaggtcgaccaaatg
gtaattcactctgcttcagacccacgaccaaaaacaaccctatgtggtgattacttctac
aactattttggtcgaggatttgacatattgtttgacggccagacccacaagatcaaaaag
tttgttctacatacaaattatccggggcatgccgacttcaattcatacatgaagtgcaat
ttcattatccatgctacagaatttgatggtgcatttcatcaagatatgaattcctcaaaa
agtaggattacgcccgggtcaaagtgggaccaagtgaaggagatcctcggagattgtggc
cgagctgctattcaaacacaaggctctacaagcaatccatttggctccacttttgtctat
gggtaccagaatgttgcttttgaggtcatgaagaatggctatattgctaccgtgactctt
ttccaatcatactaa

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