Cynara cardunculus var. scolymus (artichoke): 112512746
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Entry
112512746 CDS
T05604
Name
(RefSeq) flowering locus K homology domain-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112512746
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112512746
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
112512746
NCBI-ProteinID:
XP_024974635
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Position
LG 5:complement(1494166..1501207)
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AA seq
470 aa
AA seq
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MAEDNISEHETEVMPENSVPIEVQVSENDQGDAIETQDNENEEGGDALEGAAVEGAAAEG
VVEKKWPGWPGENVFRMLVPVQKVGGIIGRKGEYIKKTCEETRARIKILDGPPGTTERTV
LISAKEEPDVSIPPAMDGLLKVHQRIIDADSDSTHAPPGGAGTICTRLLVAGTQGGSLIG
KQGATIKTIQDSSNCKIRVIGGENLPVFALPDDSVVEIQGETTGVHKAVELIATHLRKFL
VDRSVIGIFEMQMQMPNARPNQEMPPPQPWAPSPQGFPMNAGGGPGFGPNQYMPPQHQYD
NYYPRVDMPPPMDKQPRQGPPSYGRDPSMGPPHSAGVQPQQSIVTKVSQNMQIPLSYADA
VIGTSGTNISYIRRASGATIAIQETRGVPDEMTVEINGSASQVQTAQQLIQNFVAEAATA
AQNSAGPPPSQGYNPYPGHAPAYPSQPPPAGHAPAAADYGGPVYGGSYGY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggataacattagtgaacatgagaccgaggtgatgcctgagaattctgttcca
attgaagttcaagtttccgaaaacgatcagggggatgctatagaaactcaagataatgag
aacgaagaaggtggtgatgctctagagggtgctgcggtggagggtgctgctgcagaaggt
gttgtggaaaagaaatggcctgggtggcctggagagaacgttttcaggatgttggtccct
gtgcaaaaagttggtggcattattggtcgcaaaggagagtacataaagaaaacttgcgaa
gaaacacgggctcgcattaagatccttgatggtcctcctggtactactgaaagaactgtg
ttgatttctgcaaaggaagaacctgatgtttctattcctcctgcaatggatggtttgctg
aaagttcatcagcgcatcattgatgctgatagcgattctactcatgccccgcctggaggg
gcgggaactatatgcacaaggttactcgtggcaggtacgcaaggtggaagcttgataggg
aagcagggtgccaccataaagaccattcaagattcttcaaattgtaaaattcgggttata
ggaggagaaaacctaccagtttttgctctacctgatgatagtgttgtcgagatacaaggg
gagactacaggtgtacacaaggctgtggaactgattgcaactcatctaagaaagttttta
gtcgatcgcagtgttattgggatatttgagatgcaaatgcaaatgccaaatgctcgtccg
aatcaagagatgccccctccccaaccttgggctccatctccccaaggtttcccgatgaat
gctggcggtggacctggctttggacccaatcaatatatgccacctcagcaccaatatgat
aactactatccacgggtagacatgcctccgccaatggataaacagcctcgtcaaggtcca
ccttcttatggtagggatccgtctatgggaccacctcatagtgcaggtgtgcagccacaa
cagtctatagtcacaaaggtctcacagaacatgcaaatccctctttcatatgctgatgct
gtaattggtacctccggaactaatattagctatattcgacgagccagtggtgcaaccatt
gcgatacaagaaacacgaggtgttcctgatgaaatgactgttgagataaacggatcagct
tcacaagttcagaccgctcaacagttgatacagaatttcgttgctgaagctgcaactgcc
gctcagaactcagctggtccaccgcctagccaaggctataatccataccctggtcatgct
cctgcttacccttctcaaccaccacctgctggccatgcaccggctgcagccgactatggt
ggacctgtgtatggcggcagttacgggtattga
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