Cynara cardunculus var. scolymus (artichoke): 112512768
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Entry
112512768 CDS
T05604
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112512768
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112512768
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112512768
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
112512768
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
112512768
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112512768
Prokaryotic type
112512768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
112512768
NCBI-ProteinID:
XP_024974667
LinkDB
All DBs
Position
LG_5
Genome browser
AA seq
965 aa
AA seq
DB search
MAFSNASLLSSCSLYRLNPVLFSHRRCSVTLYRLHLRILKSRFLAVAASDNGVFTSPEIA
KSFDFTSEERIYNWWDSQGYFKPNFDKGSEAFVVTMPPPNVTGSLHMGHAMFVTLEDIMI
RYHRMRGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGREEFTKRVWEWKEKYGGT
ITNQIRRLGASCDWTREHFTLDDQLSRAVIDAFIKLHEKGLIYQGSYMVNWSPNLQTAVS
DLEVEYSEEPGTLYHIKYRVAGGSRSDYLTIATTRPETLFGDTAVAVNPEDGRYTKYIGK
SAIVPMTFGRHVPIIADKYVDKDFGTGVLKISPGHDHNDYLLARKLGLPILNVMNKDGTL
NEVAGLYSGLDRFEARKKLWSELEETGLAVKKEAHTSRVPRSQRGGEIIEPLVSKQWFVT
MEPMAEKALEAVRKGELTIMPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYVVGKDS
EEDYIVAKSTDEALKKAQQKYGKDVEIYQDPDVLDTWFSSSLWPFSTLGWPDVSAEDFRR
FYPTSVLETGHDILFFWVARMVMMGIEFTGTVPFTNVYLHGLIRDSQGRKMSKTLGNVID
PLDTIKEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPTRSDP
SAWESLLAQKFDKEEFLLRLPLPECWVVSKLHILVDAVTTSYDKFFFNDVARETYDFFWG
DFADWYIEASKAHLYQSEDQAVASTSQAVLLYVYENILKMLHPFMPFVTEELWQALPNRK
EALIVSPWPLTSLPRNLTAIKRFENLQALTRAIRNARAEYSVEPAKRISASIVATSDVIQ
YISREKDVLALLSRLDMQSINFMDSPPGDANQSVHLVAGEGLEAYLPLADMVDISAEVQR
LSKRLSKMQTEYEGLLARLNSPKFVEKAPEEVVRGVREKAAEAEEKLNLTKTRLSFLQST
ILVSE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctccaatgcctccctcttatcttcttgctctttatacagactcaatcctgtt
ctcttctctcatcggcgttgtagtgtcactttgtatcgattacatcttcgtatcctcaaa
tcaaggtttttagcagttgctgcatctgacaatggagtatttacttctcccgagatagca
aaatcttttgactttacttccgaggaacggatatacaactggtgggattctcaagggtat
ttcaagccgaacttcgataagggaagtgaagcttttgttgttactatgccgcctccaaat
gtgactggttcgttgcacatggggcatgctatgtttgtgactcttgaggatattatgatc
agataccaccggatgaggggcaggcctactctctggcttcctgggacagatcatgctggc
attgcaacccagttggtcgtggaaagaatgttggcttctgaaggaataaagagggttgaa
ttgggtagagaggagttcaccaagcgagtttgggagtggaaggagaagtatgggggaacc
attacaaatcaaatacgccgactgggtgcttcttgtgattggactagagaacatttcaca
cttgatgaccagctaagtcgtgctgttattgatgcctttattaagcttcacgagaaaggg
cttatctatcaaggctcttacatggtcaactggtctccaaatttacagactgcagtttct
gatttggaagttgaatattctgaagaacctggtactctatatcatatcaagtatcgtgtc
gctggaggttctaggagtgactatctaacaatagcaaccacacgaccagaaactttattt
ggtgatacagctgttgcggtgaatcctgaggatggaagatacacaaaatatattggaaag
tcagccatagttccaatgacattcggtcgtcatgtcccaattattgctgacaagtatgta
gataaagactttggaactggtgttttaaagataagccctgggcatgatcacaatgattac
cttcttgctagaaagcttggtcttccaatacttaatgtcatgaacaaggatgggaccctg
aatgaggttgctggattgtatagtggccttgatcgctttgaggcacgaaagaagttgtgg
tctgaacttgaggagacaggcttagctgtcaagaaagaagctcacacttcaagagttcct
cgttctcaaagaggtggagaaatcatagagcctcttgtgagcaagcagtggtttgtgact
atggagcctatggctgaaaaggcccttgaggcagtgagaaaaggagaactaaccattatg
cctgaaagatttgaaaaaatatataatcactggctatcaaatatcaaggattggtgtata
agcagacaactatggtggggacacaggattccagtttggtatgttgtaggcaaagactct
gaagaagattacatagttgctaagagcacagatgaagctcttaaaaaagctcaacaaaag
tatggaaaagatgtggaaatatatcaagatccagatgttcttgacacttggttttcgagt
tctttatggcccttcagtactttgggatggcctgatgtgtctgcagaggattttagacgg
ttctacccaacatcagtgcttgaaacagggcatgatatattgttcttctgggtggcacga
atggtgatgatgggcatcgagttcaccggtactgtcccgtttacaaatgtgtatctgcat
ggacttattcgggattctcagggacgaaaaatgtctaaaacattgggaaatgttatagat
cccttagatactatcaaagagtttggcactgatgctttgcgctttacacttgctttagga
actgcgggtcaggatctaaatttatcaactgagagattgacatctaacaaggcatttacc
aacaaattgtggaatgctggcaagtttgtcctgcaaaatttacctactcgaagtgatcca
tcagcttgggaaagtttattggcccaaaagtttgataaggaagagtttctgctcaggctg
cctttaccagagtgttgggtggtttcaaaactgcacatacttgttgatgcagtcacgaca
agttatgacaagtttttctttaatgatgttgcacgggaaacatatgatttcttctggggt
gattttgctgattggtacatcgaagcaagtaaagctcacctttaccagtctgaagatcag
gcagttgcttctacatcccaggcagttcttttatatgtttatgagaacatattaaaaatg
ctccatccatttatgccttttgttactgaagaactatggcaggcattgcctaatagaaaa
gaagctctaatagtgtctccatggcctcttacttcacttccaaggaatctcactgccata
aaaagatttgaaaacttgcaagctttgacacgagcaataagaaatgcaagggcagaatat
tctgttgagcctgcaaagcgtatatctgcatctatcgttgctacctccgatgttatccag
tatatttctagagaaaaggatgtattggctcttctgtctagacttgatatgcaaagcatc
aattttatggattcacccccaggggatgcaaatcaatctgttcatcttgttgctggggaa
ggtctagaggcgtatcttcctcttgcagatatggtagatatctctgcagaagttcaacga
ctatccaagcgtctctcaaagatgcaaacagaatacgaaggacttctcgctcgcttgaac
tctcctaagtttgttgagaaagctcctgaggaagttgttcgtggggttcgtgaaaaggca
gccgaggcagaagagaaattgaatctaactaaaacccgtttatcatttctccaatcaaca
attttggtctccgagtaa
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