KEGG   Cynara cardunculus var. scolymus (artichoke): 112512773
Entry
112512773         CDS       T05604                                 
Name
(RefSeq) embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X1
  KO
K28434  abasic site processing protein HMCES
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112512773
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     112512773
SSDB
Motif
Pfam: SRAP
Other DBs
NCBI-GeneID: 112512773
NCBI-ProteinID: XP_024974679
LinkDB
Position
LG 5:complement(3288311..3294911)
AA seq 367 aa
MCGRCRCSLRPDDIPRSCNLGNRPVRFVDTDRYRPAYNVSPGSNLPVVRRALGADGEEVV
VQCMKWGLIPSFTKKTEKPDYYRMFNARSESIGEKASFRRLVPANRCLVVVEGFYEWKKD
GSKKQPYYIYLKDERPLVFAALYDSWKNSEGEIQYTFTILTTSSSSALGWLHDRMPVILG
NKGSTDEWLDGHSSSKFDSLLKPYEELDLVWYPVTPAMGKPSFDGPECIKEIQIKTNETK
PISMFFAKSTKTENQSEPYIITAHKKPAITEKPQSLKEEPATVDCIDHQSHSDKVCDESK
SNVSTPTSVSDTSHLKREYDEYRKPSVDEADKQYPSPAKRKAIKSAGDKQKTLFSYFGKG
KYYDRYT
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtgcggccgttgtcgatgttctctccggccagacgatatccctcgctcttgcaatctc
ggtaaccgccccgtccgtttcgtcgatacagaccggtatcgtccggcatataatgtttct
cctggatcaaacttgcctgtcgttcgaagagccctgggagcagatggtgaagaagttgtt
gtgcagtgtatgaaatgggggcttattccaagtttcactaagaagactgaaaaacctgac
tattacaggatgttcaatgctcgatcggagtcaataggtgaaaaagcttccttccgccgt
cttgttcctgcaaataggtgtctggttgtagtggaaggattttacgagtggaagaaagat
gggtcgaaaaagcagccgtactatatttatctgaaggatgaacgcccccttgtatttgct
gctctgtatgattcttggaaaaactctgaaggggagattcaatacaccttcactattttg
actacaagttcttcgtcagcccttggttggctgcatgacaggatgcctgttatattaggg
aataagggatcgactgatgaatggttagatggacattcgtcttccaagtttgattcatta
cttaagccatatgaggagctagacttggtttggtaccccgtgacacctgcaatgggcaag
ccttcttttgatggaccagagtgtatcaaggagattcaaataaagaccaacgaaacaaaa
ccaatctcaatgttctttgcaaagagcactaaaacggaaaatcaatcagagccttacatt
ataactgcacataaaaagcctgccataactgaaaagccacaaagcctaaaagaggaacct
gccactgtagactgcatcgaccaccaatcacattcggacaaagtttgtgatgaatcaaag
tctaatgtctccacaccaacttctgtttccgacacttcgcatctcaagcgtgagtatgat
gagtatagaaaaccatccgttgatgaagctgacaagcagtatccaagcccagctaaaagg
aaggccataaagagtgctggtgataaacagaaaacactattctcttattttggcaaaggt
aaatattatgatcgttacacatga

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