Cynara cardunculus var. scolymus (artichoke): 112512778
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Entry
112512778 CDS
T05604
Name
(RefSeq) probable zinc transporter protein DDB_G0291141 isoform X1
KO
K14692
solute carrier family 30 (zinc transporter), member 5/7
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112512778
Transporters [BR:
ccav02000
]
Solute carrier family (SLC)
SLC30: Zinc efflux transporter
112512778
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cation_efflux
Motif
Other DBs
NCBI-GeneID:
112512778
NCBI-ProteinID:
XP_024974685
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All DBs
Position
LG 5:complement(36025307..36028560)
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AA seq
812 aa
AA seq
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MASNHHNHRPHRLSLPPRTSTPTTPITPSRHYPPFTPTPTPSKHRLTSFSATKSKKISPS
SLFLLLFSLRSLYSLLPFLQSSPSSFSVFPFSFLVSLLSFLLSLSFSLFKQTVKPKSIFA
FHRSITKFQQRILFAKSVLLAIVFLLRFQALRYCGTAAMILAEMSGYVASHFVAGRNRSL
IHLDRVGANKVRGFFALFIGVFLLSISWDRIECFPFSFVNLSKLGFSSVLIPNSEKCVRV
WPMLLPFLSGFLGGYEQGSVNWGTLRDLGRKEVRLIALFYTTILLFIPAAISMLVFEAEG
DSVSIGSLGWPLANTVVFGVLLSENYTDERLISSKDFRKEFLVTFVCTIILELLYYPELS
LWGLLICGMLLGVGVMELDPIHSNSMELGLESPDTFLASITKIIRHIVSERKSRKIAVFL
LINTGYMVVEFVAGFMNNSLGLISDACHMLFDCAALAIGLYASYIARLPANDKYTYGRGR
FEVLSGYTNAVFLVLVGALIVLESLERILEPQEISTSSLLTVSIGGLAVNVVGLIFFHDE
HHHAHGGGASCSHSHSHHHSHVHSGHDHDHDHHDHDHHGHYHDHVPTSSIGVPGEDKQKH
HDHQHDHHHDNHNDHGQHQDHHDHGQHQDHHDHGQHHDHHDHGHRQDDHDHGHHHDKQKH
HHHHIDHNMEGIFLHVLADTLGSVGVVVSTLLIQYKGWLIADPACSIFISVLIVSSVIPL
LRNSAEVLLQRVPRAHEHDLKAAVSSIMKIKGISGIQNFHVWSLANNDIIGTLRMYISSG
TDKISTKKQVSDILHDAGIKDLTLQVEYVVGS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaccaccataaccaccgtcctcaccgcctctctcttccgccgcgaacctcc
actccaactaccccaatcaccccctcccgccactacccgccgttcactccaactccaacc
ccatccaaacaccgtctaacgtcgttctccgccacaaaatccaaaaaaatctctccgtct
tccctcttcctcctcctcttctctctccgatctctctactctctcctcccattcctccaa
tcatcgccgtcgtcgttctccgtcttcccgttctcgttccttgtatctctcttatcgttc
cttttatctctctccttctctctcttcaaacaaaccgtaaaacctaaatccatcttcgcg
tttcatcgttcaatcaccaaattccagcaaaggattctcttcgccaaatcggttcttcta
gcaattgtcttcctcctccgtttccaagctctccggtactgcggcaccgccgccatgatc
ctggcggaaatgtccggttacgtggcctctcatttcgtcgccggacgaaatcgaagcttg
attcatctagatcgcgttggtgccaacaaggttcgtggatttttcgcactgtttattgga
gtatttctgttatctattagttgggatcgaattgaatgctttccattctctttcgtcaac
ctcagtaaactagggttttcatctgttcttattcccaatagtgagaaatgcgttagggtg
tggccaatgctgcttccttttctttcagggtttttgggtggttatgaacaagggtccgta
aattggggaacacttagggatttaggtcgaaaagaggttcgattaattgcattgttttac
actacaatcttgctgtttattcctgctgccattagtatgctggtctttgaagcagaagga
gatagtgtttcaattgggagcctagggtggccattggcaaacacagtagttttcggggtg
cttttgagtgaaaactacaccgatgagagactgataagctcgaaagatttccgaaaagag
tttcttgtgacatttgtatgcacgattatactcgaattgctctattatccagagctttcg
ctatggggactactgatttgtggtatgttgcttggagttggtgtgatggaattagatcca
attcactcgaattctatggaattagggttagaatccccagatacgtttttagcctcaatc
acaaagatcattcgtcacattgtgagcgaaaggaagtcaagaaagattgcggtttttctc
ttgattaacacaggttatatggtggtggaatttgttgcgggttttatgaacaatagtctt
ggattgatatctgatgcctgccatatgttgtttgattgtgccgcacttgcaatcggtctt
tatgcttcatatattgctagattaccggcaaatgataagtatacttacgggcgtgggaga
tttgaggttttatctggttatacgaatgcggtttttcttgttttggttggagcgttgata
gtgttggagtccttggaaagaattttggagcctcaggagatttcgacttctagtttgttg
acggtttcgattggtgggcttgcagttaatgtggtggggttgatcttctttcacgatgag
caccatcatgcccatggtggcggtgcatcatgttcacactcgcattctcatcatcattca
catgtgcatagtggacatgatcatgatcatgatcaccacgaccatgatcaccatggccat
taccatgatcatgttcccactagctcaattggtgttcctggagaagataaacaaaagcac
catgaccatcaacatgaccaccaccatgataatcacaatgaccatggccagcatcaggat
caccatgatcatggacagcatcaggatcaccatgaccatggccagcatcatgatcatcat
gaccatggccatcgccaggatgaccacgaccatggccatcatcatgataaacaaaaacac
catcaccatcacatcgatcacaacatggaaggcattttcttgcacgttctagccgacacc
ttaggaagtgtcggtgtcgtcgtttcaacgcttctcatccaatacaaaggatggctcatc
gccgaccctgcttgctccatcttcatatccgtattaatcgtctcttccgtgattccattg
ctaagaaactccgcggaagttttattgcaacgagttcctagagctcatgagcacgaccta
aaagcagcagtaagtagtatcatgaagataaagggtatatccggcattcaaaactttcac
gtatggagtcttgctaacaatgatatcattggtacccttcgcatgtacatctcttcggga
acagacaagatttctacaaagaaacaggtttcagacattttacacgatgcgggcatcaag
gatttgacattacaggtggaatatgttgtcggtagttga
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