Cynara cardunculus var. scolymus (artichoke): 112512788
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Entry
112512788 CDS
T05604
Name
(RefSeq) scarecrow-like protein 9
KO
K27753
GRAS family protein LISCL
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112512788
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Other transcription factors
GRAS
112512788
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Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
112512788
NCBI-ProteinID:
XP_024974700
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Position
LG 5:9593686..9596187
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AA seq
758 aa
AA seq
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MDPRIRRFASSANGNGIKFGNQSITAKALDNPPRFENACSVYDPVNGNLDSVSVYDHNFR
GIQFDRNFRGIQFDPPTSSSLVVSADELHEDCDLSDAILGYISQVLMEEDMEDKSCMLYE
SLDLQAAEKSFYDVLGKKYPPSPSYDEGLLSVDRYIESPSDYSSLDQNTYVGEFTNGSGY
LHHESNLQSLGANDVSCRSVSSSNSGNNVIDGFIDSPARTFQAPEICDENQMMLKFNKGV
EEANKFLPSDNKLLASFNGGESWPKVENSKGGELMVMVDGRNLQTWTRVRKSPCGEDDIG
VEERSIKQAAIYQDSTLRSKEIDLILLCSQGQGDVALRSLRYTLQKETSKDKLKDKEPKC
LTKGKGKGKGRSRKQKNTKEVIDLRTLLITCAQAIAADDRRNANELLKKIRQHASPFGDG
SQRLAHCFADGLEARLAGTGSQIYRALVSKKTSATDYIKAYHLYIASSPFRKISNFASNR
TIRDMAVAENATRIHIIDFGIHYGFQWPTFIQRILEKEGGPPRIRLTGIEFPQPGFRPAE
RIEETGLRLKEYASHFNVPFEYNPIAKRWEDVSVEDLKIDEGEFLVVNCMYRSKNLLDET
VGVDSARNVVLDLIKKISPDIFIHGILNGSYNAPFFVTRFREALFHFSALFDMLETNVPR
ERSERMLLERELFGREALNVIACEGSERVERPETYKQWHARNLRAGLVSFPFSREIIKMA
REKVGLYHKDFMIDVDNQWLLLGWKGRIIYAISCWKVE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagaatccggagatttgctagttctgcgaatggaaatggaattaaattcggg
aatcaaagcattactgcgaaagccttagataatccccccaggtttgaaaatgcatgttcg
gtttatgatccggtcaatgggaatctggattcggtttctgtctatgatcacaactttagg
ggtatacaatttgatcgcaactttagaggtatacaatttgatccaccaaccagttcgtcg
ctggttgttagtgctgatgagcttcatgaagattgtgatctatcggatgcaattttgggg
tatattagtcaggtgcttatggaagaagatatggaggacaagtcttgtatgctttatgag
tctttagaccttcaagctgcggagaagtccttctatgatgttcttggcaagaagtatcct
ccatcaccgtcctatgatgaaggtttgctttctgttgatcgatatatagagagcccaagt
gattattcctcattagatcagaatacatatgttggtgaattcactaatggtagtggttat
ttacatcatgagtcaaatctacaaagtcttggagccaatgacgtatcatgtaggtcagta
agttcatcaaacagtggaaataatgtaattgatgggtttattgattctccggcaagaact
tttcaggcgcctgagatttgtgacgagaatcaaatgatgctcaagtttaataagggtgta
gaagaagctaataagtttcttcccagtgataacaagctgttagcttcttttaatggaggt
gaatcttggcctaaagttgagaatagtaaaggtggtgaactgatggtcatggtggatgga
agaaacttgcagacatggacaagggtgaggaaaagtccttgtggggaagatgatataggg
gtggaagagaggagtattaagcaggcagcaatctatcaggattctactttgaggtcgaaa
gagattgatttgatccttctttgtagtcagggacaaggtgatgtagctttacggtctctg
cgctacaccttgcagaaggaaacgagcaaagacaaactaaaagataaggaaccaaaatgc
ttaaccaaggggaaaggtaaaggcaaaggccgaagtaggaaacagaaaaacacaaaagaa
gtgatagatttgagaactcttttgatcacttgtgcacaggcgattgctgctgacgatcga
aggaatgcaaatgaacttctgaaaaagatcaggcagcatgcttctccatttggcgatggg
agtcagaggttagctcactgttttgctgatggtcttgaggcacgtttggctggcactggt
agccaaatttatagagcactagttagcaagaaaacatctgctactgattacattaaagca
taccatctgtatattgcatcctcccctttcagaaagatttcgaattttgcctcaaacagg
acaataagagatatggcagtggcagagaatgccaccaggatacacatcattgattttggt
atccactatggctttcagtggcccaccttcattcaacgtattttagaaaaggaaggtggg
ccaccgaggattcggttaacaggaattgaatttcctcaacctgggttcaggccagctgaa
agaattgaagagactggtctgcggttaaaggagtatgctagccatttcaatgtgccattt
gagtataatcctattgcaaagagatgggaagatgtgagtgttgaggatcttaagattgat
gaaggtgagtttttagtggtcaactgtatgtatcgatcaaaaaacttgcttgatgagact
gttggggtggacagcgccagaaacgtggttcttgacctgataaagaagattagcccggat
atcttcatccatggaattctcaatgggtcttataacgccccattttttgtcacccgattc
agggaagctctctttcatttctcagcactatttgatatgcttgaaacaaatgtaccccgt
gagcgatctgaaaggatgctgcttgagagagaactctttggaagagaagctctgaatgtt
atagcctgtgaggggtcggagagggttgaaagaccagagacatacaagcagtggcacgct
cgtaatctgagagcagggttggtttcatttcctttttctcgtgagattataaaaatggca
agagagaaagtggggttatatcacaaggatttcatgatagatgtagacaaccaatggctt
ctactcggctggaaaggacggataatttatgccatttcttgttggaaggtcgaataa
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