Cynara cardunculus var. scolymus (artichoke): 112512967
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Entry
112512967 CDS
T05604
Name
(RefSeq) GDP-mannose 4,6 dehydratase 1-like
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00051
Fructose and mannose metabolism
ccav00541
Biosynthesis of various nucleotide sugars
ccav01100
Metabolic pathways
ccav01250
Biosynthesis of nucleotide sugars
Module
ccav_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
112512967
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
112512967
Enzymes [BR:
ccav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
112512967
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
NmrA
KR
Motif
Other DBs
NCBI-GeneID:
112512967
NCBI-ProteinID:
XP_024974861
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All DBs
Position
LG 5:complement(28986991..28988424)
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AA seq
363 aa
AA seq
DB search
MASTGSQPAVNGGEDIPKVALIAGITGQDGSYLTELLLEKGYEVHGLIRRSSNFNTQRIN
HIYIDPHNAHKARMKLHYADLTDASSLRRWIDTISPDEIYNLAAQSHVAVSFEIPDYTAD
VVATGALRLLEALRSHITTTGRTHVRYYQAGSSEMFGSTPPPQSENTPFHPRSPYAVSKC
AAHWYTVNYREAYGIFACNGVLFNHESPRRGENFVTRKITRAVGRIKVGLQSKLFLGNLQ
ASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEKAFGYVGLNWKDHVVIDK
RYFRPTEVDNLKGDSSKARKVLGWRPKVGFEQLVKMMVDEDIELAKREKVLVDAGYMDAQ
QQP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgggatcccaacccgccgttaacggcggcgaagacataccgaaggttgca
ctgatcgccggaatcactggccaagacggctcttacctaactgagcttcttctcgagaaa
ggatatgaagtccacggccttatccgtcgttcttccaacttcaatacacaacggatcaat
catatctatatcgatccacacaacgcccataaggctcgtatgaagctccactatgccgac
ctcactgacgcctcctccctccgccgttggatcgacactatctcccctgacgagatctac
aacctcgccgcacagtcacacgtggcggtgtcgtttgagatccctgattatactgccgat
gtcgtcgcaacgggagctttacggcttcttgaagccctaagatctcatatcaccaccact
ggtcggacacatgtcaggtattatcaggccggatcgtcggagatgttcggatctactcct
cctccgcagtcggaaaatactccgtttcatcctagatcgccttatgctgtttccaaatgc
gctgctcattggtatacagtcaattacagagaagcatacgggatctttgcctgcaatggc
gttctcttcaaccacgaatctccacggagaggtgaaaacttcgtgacacggaagatcact
cgagcggtaggtaggatcaaggtggggctacagagcaagctgtttttagggaacttacag
gcgtcaagagactggggattcgctggggactacgttgaggcaatgtggctgatgctacag
caggagaagccagacgactatgtggtggcgacggaggagtcgcacacggtggaggagttt
ctggagaaggcattcgggtacgttggtttgaattggaaagatcatgtggtgatcgataaa
aggtatttcaggccaacagaagtggataatttgaaaggggattcaagcaaagcgaggaaa
gttcttggatggagaccaaaagtagggtttgaacaattggtgaagatgatggttgatgaa
gatattgagttggcaaagagggaaaaagttctggttgatgctggatatatggatgctcaa
caacagccctga
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