Cynara cardunculus var. scolymus (artichoke): 112513002
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Entry
112513002 CDS
T05604
Name
(RefSeq) TBC1 domain family member 22B-like isoform X1
KO
K20360
TBC1 domain family member 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112513002
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112513002
Retrieval pathways
112513002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Get2_like
Motif
Other DBs
NCBI-GeneID:
112513002
NCBI-ProteinID:
XP_024974896
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All DBs
Position
LG 1:complement(28814350..28824342)
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AA seq
479 aa
AA seq
DB search
MKSNNSHSTEEDLKQETSPTNSPLTTLDSRFNQTLRSVQGNFLGNLWIMMLLDESKVRNF
LRLLKGRSFPGKVLITRRSDPPDGTVLGSPGVNRSPSEIDRSPSKHMDDPDEDKIHRNKP
NTSTTVNKLKPSMSNPEDKSKEAPRFVMGARATDTARLMKFTKVLGGTTVILDKLRELAW
SGVPPYLRPNVWRLLLGYAPPNSDRREGVLRRKRIEYFDCVAQYYDISDIERTDEEINML
RQIAVDCPRTVPDVTFFQQAEVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSE
HLEGSVDNWSVADLDPEKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVR
RIDEPVAKHMDEHGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIF
ASFLLTWSDKLLKLDFQEMVMFLQHLPTNNWSHQELEMVLSRAFMWHTMFDSCPNHLAT
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaacaacagtcacagcacggaagaagatctgaagcaagagacctctccaact
aattcccctcttacaacccttgattcaagatttaatcaaactctcagaagtgttcaaggt
aatttcctcgggaatttgtggattatgatgctgctagatgagagtaaagtaaggaatttt
ctcaggctgttaaagggtcgcagctttcctgggaaagtgttgataacaagaagatcggat
ccaccagatggtacagtcttgggctctcctggtgttaatcggagcccctcagaaattgac
aggtcaccaagtaaacacatggatgatcccgacgaggataaaatccatagaaataaacca
aatactagtacaactgttaacaagttgaaaccatcaatgtcaaatcctgaggataagtcg
aaggaggctccaagatttgtgatgggtgcccgagctacagatactgctaggctaatgaag
ttcacaaaagtgttggggggcacaactgtcattttagacaagttgcgtgagttagcatgg
agcggtgtgccaccttatcttcgtcccaatgtatggaggcttctcttgggatatgcaccc
cctaattcagatagaagggagggagtcctaagaagaaagcgcatcgaatattttgactgt
gttgctcagtattatgacatttcagatattgaacgtactgatgaagagattaatatgctc
cggcagattgctgttgattgtcctagaactgtgcctgatgtcactttcttccaacaagca
gaagtgcagaaatctttggagcggatactctacacatgggcaatcaggcatccagcaagt
ggatatgtccagggaataaatgaccttgcaacaccttttttagttgttttcttgtcagaa
catttggaagggagcgttgataattggtcagttgctgatttagatcctgaaaagatctcc
aatgttgaagctgattgttactggtgtctatccaagttgctcgatggtatgcaagaccat
tatacgtttgctcagccagggattcaaaggctagtgtttaaactcaaggaactagtccgg
cgaattgacgaacctgttgcaaagcatatggatgagcacgggcttgagtttctccaattc
gctttccgctggttcaactgtcttctaattcgagagatccctttccatcttgttacccgt
ttatgggacacatatcttgctgaaggcgacgctttaccagacttccttgtgtatatattt
gccagttttcttttaacatggtcagataagcttttgaagcttgatttccaggagatggtg
atgtttcttcaacatctgccaactaacaactggagccaccaagagcttgagatggtgctt
tcaagagcctttatgtggcacaccatgtttgatagttgtcccaaccacttagccacttga
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