Cynara cardunculus var. scolymus (artichoke): 112513051
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Entry
112513051 CDS
T05604
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112513051
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
112513051
Condensin II
112513051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
PUMA_CC
Laminin_II
AAA_23
CCDC93_CC
Sec3_CC
MinE
ABC_tran
ATG17_like
Motif
Other DBs
NCBI-GeneID:
112513051
NCBI-ProteinID:
XP_024974942
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All DBs
Position
LG 5:complement(35645054..35656576)
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AA seq
1249 aa
AA seq
DB search
MEEVMDTAGEFISTDPTSTPGKKSASPPRLFIKEMVMKNFKSYAGEQRVGPFHKSFSAVV
GPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLNSARVSVHFQEIIDLDD
GTYEVVPGSDFIIAREAFRDNSSKYYINGRDSKFTEVTKKLKGKGVDLDNNRFLILQGEV
EQISLMKPKAQGPHDEGFLEYLEDIIGTNKYLEKIDEAYKQLESLNEKRSGVVQMVKLAD
KERESLESVKNEAEDYMLKELSLLKWQEKAVKFASEENDTKMEEIQKTRSSLQENLTAER
EKIQESKKALKELETLHNKYMKRQEELDTGLKRCKDEFKEFERQDVKHREDLKHVKQKIK
KMDEKVEKDSTKITDITRQSEESANLIPKLEEEIPKLQKKLLDEDKILEEITESSKVETE
AFRTEVAKVRTELKPWEKELIEHHGKLEVASTEKKLLTEKHEAGCAAYVDAQEQLNDLQK
RIETKTSSIKDMQSKLEKNKLELSKARKVEQECLKEQETLMPLEQAARQKVTELKSVMET
ERNHGSVLRAILQAKASNAIEGIYGRMGDLGAIDGKYDVAISTACPGLDYIVVETTAAAQ
ACVDMLRKNSLGVATFMILEKQADHMSRMKEKVSTPEGVPRLFDLIKVQDERMKLAFFAA
MGNTVVAKDIDQATRIAYGVNKEFRRVVTLDGALFEKSGTMSGGGNKPRGGKMGTSIRAT
SVSGEAVAEAENELAQIADRLSNLRQQISEVVRHYKDLEKTATHIEMELAKSQKEIESLN
SQHEYLGKQLDSLKAAAKPSKAEVSRLKELAKVISEEENEIKRLTLGSKQLKEKVLELQS
KIENAGGERLKSQKAKVNKIQNDIDKNSTEMNRHKVQIETGKKLLKKLTDGIDESKNEKE
RLVAQKEKLLNTFKEIEQKAFKVQDDYKKTEELINQHKDVLGKAKSDYEKLKKSVDELRA
SEVDADYKLQDMMKMFKELEMKAKGYRKKLEDLNNALSKHMEQIKKDLVDPEKLQATLGD
ESFSKGCDLKRALETVALLEAQMKEMNPNLDSISDYRKKVSVYNERVEELNLVTNERDET
KRQYDEWRKKRLDEFMAGFNTISMKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRP
PKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDR
TKDAQFIIISLRNNMFELADRLVGIYKTDNCTKSITINPGSFVVREKVA
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtgatggataccgccggcgagttcatatccacggatccgacgtcgactccg
gggaaaaaatcggcatcacctccaaggcttttcatcaaagaaatggttatgaagaatttc
aaatcatacgccggtgaacaacgtgttggcccttttcataagagcttttccgctgtagtt
ggtcctaatggaagtgggaagagtaatgtgattgatgctatgttgtttgtattcggaaag
cgagctaagcagatgcgtcttaacaaagtgtcggagcttattcacaattccacgaatcac
caaaaccttaacagcgcacgtgtatctgttcactttcaggaaatcatcgatctggacgac
ggaacatatgaagttgttccaggaagtgattttataatagctcgtgaagcttttcgagat
aattcttctaagtactatattaatgggcgtgacagtaaatttacggaggttaccaaaaaa
ctaaaagggaaaggagttgacttggacaataaccggtttctgattcttcagggtgaggtg
gagcaaatttcacttatgaagccaaaagctcaaggtccccatgatgaaggctttcttgaa
tacctggaggatatcattggaactaacaaatacttggaaaaaattgatgaggcctataaa
cagcttgaatcactgaatgaaaagaggtctggggtggtgcagatggttaagttagctgat
aaagaaagagaaagcctagagagtgtgaagaatgaagcagaagattacatgcttaaggag
ttgtcattgttaaaatggcaagaaaaagctgtaaaatttgcttctgaggaaaatgataca
aagatggaagaaattcaaaagaccaggtctagccttcaagaaaatttaacagctgaaagg
gagaagattcaggaaagcaagaaggcattaaaggagctcgagacattgcataataagtat
atgaagagacaagaggaactagacactgggcttaaacggtgcaaggatgaattcaaggaa
tttgagcggcaggatgtgaaacaccgagaagacttaaaacatgttaaacaaaagatcaag
aaaatggacgagaaggttgaaaaggattcaacaaagattacagatatcacaaggcagtct
gaagagtctgctaatctaatccccaaactggaggaagagattcctaaactgcaaaaaaag
ttgttggatgaggataaaatattggaggaaattacagagagctccaaagttgaaactgag
gcatttcgtacggaggttgctaaggttcgtactgaactcaaaccttgggaaaaagaactg
attgagcaccatggaaagcttgaagttgcatccactgaaaagaaacttctcactgagaag
catgaagctggttgtgcggcatatgtagatgctcaagaacaattgaacgacttacagaag
agaattgaaacaaagacttcaagcataaaagacatgcaatctaagttagagaaaaacaag
cttgaattatcaaaagctcgtaaagtggaacaggaatgtctaaaagaacaagagacactg
atgcctcttgaacaagcagcaagacagaaagtcacagagctaaagtctgtcatggaaaca
gaaaggaatcatggatctgttttgagagcaatattgcaagcaaaagcttcaaatgcaata
gagggaatttatggaaggatgggggacttgggcgctattgatggaaagtatgatgtggcc
atttcaacagcgtgtccgggtcttgattatattgtagtggaaacaactgcagcagcacaa
gcatgtgttgacatgcttcgcaagaacagccttggggttgcgaccttcatgatattggaa
aagcaagctgatcatatgtctagaatgaaggaaaaagtaagcactccagagggtgtgcca
cgcctctttgatctaatcaaggtgcaagatgaaagaatgaaacttgctttctttgcagca
atggggaacactgttgttgccaaggatattgatcaggcaacacgtattgcgtatggtgtg
aataaagaatttcggcgtgttgttacacttgatggtgctctttttgaaaaatctgggact
atgagtggtggcggaaataaaccacgtgggggtaagatggggacttccatcagagccact
agcgtctctggagaagcggttgctgaagctgaaaatgagctcgctcagatagcagacaga
ttaagcaatctaaggcaacagatttctgaagtggttaggcattacaaggatttggaaaaa
accgctacacatattgaaatggagttggctaaaagccaaaaggagattgaaagtttgaat
tcacaacatgaatatcttggaaaacaacttgattccctaaaggctgcagcaaagccaagt
aaggctgaagttagtcgacttaaggaactcgcaaaagttatatcagaagaagaaaatgag
atcaagaggttgacattaggatcaaagcagctgaaggagaaggtgttggagcttcaaagt
aaaatagaaaatgcagggggtgaaaggttgaaaagccaaaaggcgaaggttaacaagatc
caaaatgacattgataaaaacagcacagagatgaatcgacacaaagttcaaatagagacg
ggcaagaagttgttgaaaaaactaacagatgggattgacgaatcaaagaatgagaaagaa
aggctcgttgcacagaaggaaaagttgcttaacacctttaaagagattgagcagaaagca
ttcaaggttcaggatgattataagaagacagaagagctgataaatcaacacaaggatgtg
cttggaaaagcaaaatccgactacgaaaagttgaagaagtctgtagatgagttgcgggca
tctgaggttgatgctgactataagttacaagacatgatgaagatgttcaaagaattggaa
atgaaggcaaaaggatacaggaaaaagcttgaggatcttaacaatgctctttcaaagcat
atggaacaaattaagaaagatctagtggacccagaaaagcttcaagccacacttggagat
gaatccttttccaagggctgtgatctaaaacgggcactagaaacggtggctttacttgaa
gcacaaatgaaagaaatgaatcctaatcttgattcgatctctgactaccgtaaaaaagta
tcggtatacaatgagcgagtggaggagcttaacttggtaactaatgaacgtgatgagaca
aaaaggcaatatgatgaatggagaaagaaaaggttagacgagttcatggcagggtttaat
accatatctatgaagttgaaggaaatgtaccagatgatcactctcggaggtgatgcggaa
ctcgagttggtggattcattagatcctttctcagaaggtgttgtctttagcgttaggcct
ccaaagaagagttggaaaaacattgcaaatttatcaggaggcgaaaagacactcagctca
ctagcccttgtctttgcattgcatcattacaaaccgacaccactctatgttatggatgaa
attgatgcggctttagattttaaaaacgtttcaattgtggggcattatgttaaagatcgt
accaaagatgcacagtttatcatcatcagtttgagaaacaacatgtttgagttggctgat
cgacttgtggggatttacaaaaccgataattgcaccaagagcatcaccatcaatccagga
agttttgttgttcgcgaaaaggttgcataa
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