Cynara cardunculus var. scolymus (artichoke): 112513153
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Entry
112513153 CDS
T05604
Name
(RefSeq) microtubule-associated protein RP/EB family member 1C-like
KO
K10436
microtubule-associated protein, RP/EB family
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112513153
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112513153
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
112513153
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
112513153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EB1
CH
CH_2
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
112513153
NCBI-ProteinID:
XP_024975084
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All DBs
Position
LG 5:33489905..33495008
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AA seq
319 aa
AA seq
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MATNIGMMDSAYFVGRSEILAWINSTLRLNLSKVEEACSGAVHCQLMDASHPGMVPMHKV
NFDAKTEYDMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVSGG
GHQNYNPQERREACKGGKDVSKKFAPSQPTRGSTAAPRTHNSRKPDAPSVNSTAPPAKNA
KPASTVDTSAYDQQITELKLTMDSLEKERDFYFAKLRDIEILCQLPSISSLRAIEAIKRI
LYAAEEDATTVEEAQAMILKQGNPISEEEEEEQSKSDSQKRKNMVNAEVDVAANTALSPR
RRVSDASDVHSSGSPLISY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatatcggaatgatggattctgcttactttgtcggtcgatctgagatctta
gcctggatcaacagcactctccgactcaatctctccaaagtcgaagaggcatgttctggt
gctgttcattgtcagctcatggatgcatcacatcctggtatggtgcctatgcacaaggtc
aatttcgatgccaagacggaatacgacatgattcagaactacaaggttcttcaagatgtt
ttcaacaaactcaagatcaccaagcacattgaggtgagcaagctggtgaaaggaagacca
ctggataatcttgaattcatgcaatggatgaaacgatactgtgattctgttagcggaggc
ggtcatcaaaattacaatcctcaggagagaagagaagcttgcaaaggtgggaaagatgtg
agcaagaaattcgcaccatcacaaccgactcggggttccacggctgcacctagaactcat
aattctcgaaaacccgatgcaccctctgtcaactcaacagcccctcctgccaaaaacgct
aaacccgcttcaaccgtagacacatctgcatacgatcaacagataactgaactgaaacta
acaatggatagcctcgagaaagaaagggatttctactttgcgaagctgagagacattgaa
atcctgtgccaacttccctccatctcaagtttgcgggccattgaagccataaaaaggatc
ttgtatgctgctgaagaggatgcgacgaccgttgaagaagcccaagccatgattctcaag
caaggaaatccgatatctgaagaagaagaagaagagcagtcgaaatcagattcacagaag
aggaaaaacatggtgaatgccgaagttgatgtagccgcgaacacagcattgtctcctagg
cgaagggtctcggatgcttccgatgtccattctagcggttcgcctcttatatcctactga
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