Cynara cardunculus var. scolymus (artichoke): 112513248
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Entry
112513248 CDS
T05604
Name
(RefSeq) mitochondrial Rho GTPase 1-like
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112513248
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ccav04031
]
112513248
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
112513248
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
112513248
GTP-binding proteins [BR:
ccav04031
]
Small (monomeric) G-proteins
Rho Family
Miro
112513248
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
EF-hand_6
EF-hand_7
EF-hand_1
MMR_HSR1
EF-hand_5
Dynamin_N
AAA_16
SRPRB
ATPase_2
DAP3
AAA_27
Motif
Other DBs
NCBI-GeneID:
112513248
NCBI-ProteinID:
XP_024975229
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All DBs
Position
LG 1:20439704..20454371
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AA seq
646 aa
AA seq
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MAGGGSTAKSNSTTSVRIVVAGDHGTGKSSLIITAAAEAFPANVPPVLPPTRLPEDMFPD
RVPVTVIDTSSSLENRGKLADELKRADAVVLTYACDQPSTLERLSTFWLPELRRLEVKVP
VIVAGCKLDLRDEQQAVSLEQVMSPIMQQFREIETCIECSAYKHIQIPEVFYYAQKAVLH
PTAPLFDQEAQTLKPRCVRALKRIFILCDHDRDGALSDAELNDFQVKCFNAPLQPSEIVG
VKRVVQEKLPEGVHENGLTLTGFLFLHALFIEKGRLETTWTVLRKFGYNNDIRLGDDQLL
SPIKRTPDQSVELTSEAVEFLRGVFSLFDIDGDGALNAHELEDVFSTAPESPWSEAPYVN
AAEKNALGGLSLDGFLAEWALMTLLDPVLSVENLIYIGYAGDPSSAVRVTRRRRVDRKKQ
HSDRNVFQCFVFGPKEAGKSSLLHSFVGRQFSEVYTPTTEERYTVNIVDQPGGTKKTLIL
REIPEDAIGNFLSHKDALAMCDIAVFVHDSSNESSWLRATELLVQVASQGESTGYEVPCL
IVAAKDDLDPYPTAIQDSTRVSQDMGIEAPIPISAKLGDFNNIFRRIVRAAEHPHLSIPE
TEAGKTRKQYHRLLNRSLMVVSVGAAVAIVGLAAYRVYATRKNASS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggtggttctactgccaagtcgaactctacaaccagcgttcggatcgttgtt
gccggtgaccatggcaccggtaagtccagcttgatcatcaccgctgctgcggaggctttt
ccggcaaatgtccctccggtgttgcctcctaccaggttgccggaggatatgttccctgac
cgtgtccccgttacagtcattgatacgtcttccagtttggagaatagaggtaaacttgct
gatgaactgaagagagcagatgcagttgttcttacctatgcgtgtgaccagccttcgaca
cttgaacggttgagtacgttctggcttcctgaacttcgacggttagaggtaaaggttcct
gttatagtggcaggttgtaagttggatctaagggacgagcaacaagcagtcagtctggag
caggtgatgtcacctataatgcaacagtttcgggagattgaaacttgtattgaatgttca
gcatacaaacatattcagatcccagaggtgttctactatgcccagaaggcggtgcttcat
ccaacagccccactattcgatcaggaggcacaaactttgaaacccagatgtgtcagggct
ttaaagagaatatttattctatgtgatcatgatagagatggtgctctaagtgatgcagag
ttgaatgatttccaggtcaaatgttttaatgctccactgcaaccctcggaaatagtgggt
gtaaaaagagttgtacaagaaaaactgcctgaaggagtccatgagaatggccttacatta
acaggcttccttttccttcatgcactatttattgaaaaaggtcgtctagagacaacatgg
acagtcctaagaaaatttggttacaacaatgatataaggcttggcgatgatcagctgctt
tctccaattaaaagaactcctgatcagagtgtggagctgacaagtgaagctgtggaattc
ctcagaggtgttttctccttgtttgacatcgatggtgatggggctcttaatgcacatgag
cttgaggatgttttttctactgcaccagaaagcccttggagtgaagcgccatatgtgaat
gcggcagagaaaaatgcattgggagggttatcacttgacggttttttggcagagtgggct
cttatgacacttctagatccagttcttagtgttgagaacctcatatacattggatatgct
ggtgatccttcttctgcagtaagagttactcggagaagacgcgttgaccgcaagaagcaa
cactcagaccgaaatgtcttccagtgcttcgtttttggaccaaaagaagcgggaaagtcg
tcgttgttgcattcttttgttggaagacagttttctgaagtatatacaccaaccaccgag
gagcgatatacagttaatattgttgatcagcctggtggaacaaagaagactttgattttg
cgcgagatacctgaggatgctattggaaactttctgagtcataaggatgctttggcaatg
tgtgatatagcagtttttgtccatgacagttcgaacgagtcttcgtggttaagagcaaca
gaattgcttgttcaagttgcgagtcaaggggaatctactgggtatgaggttccttgcctc
attgttgcagctaaagacgaccttgatccttatccaactgcaatacaagattcaacaagg
gttagtcaggatatgggaatagaggctccgatacctataagtgcaaagttgggtgacttt
aataacatatttcggagaatcgttagagcagcagaacaccctcatttaagcattcctgag
acggaagctgggaaaactcgaaaacagtatcacaggcttcttaaccgttccctaatggtt
gtttcagtgggagccgcagtcgcgattgttgggctagctgcgtaccgtgtttatgctaca
aggaagaatgcctcatcttga
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