Cynara cardunculus var. scolymus (artichoke): 112513343
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Entry
112513343 CDS
T05604
Name
(RefSeq) upstream activation factor subunit spp27-like
KO
K15223
upstream activation factor subunit UAF30
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112513343
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
112513343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Vma22_CCDC115
Sporozoite_P67
CCD97-like_C
CDC45
DDHD
Motif
Other DBs
NCBI-GeneID:
112513343
NCBI-ProteinID:
XP_024975346
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All DBs
Position
LG 5:34200171..34208903
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AA seq
311 aa
AA seq
DB search
MVSDSELVGRLREFLSTSDLNTTTTASVRRQLEQDFGIDLKNKKAFIREQVDLYLESQQQ
NEDDNEGNDEEEEEEVDEEEEEETSNGKSGGSRKRGSKKENKEVKKKGGGFTKLCSLSPQ
LQQFTGVPELARTEVVKQLWIYIREHNLQDPANKKNILCDGPLRELFGVDSIDMFQMNKA
LAKHIWPLNSDGAPVSLAPKEKPQKKEREEDSEEPKRKEKRQKGAGGSGILAPIPLSEAL
VKFLGTGENALARSDVVKRIWDYIKQNNLQDPSDKRRILCDDKLKELFDVDTFNGFTVSK
LLTTHFIKAER
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggactcggagctcgtcggccggcttcgggagttcttaagcacgtctgatcta
aacacgaccacaacagctagcgtacgccggcagctcgagcaagattttggaatcgatttg
aagaataaaaaggcgtttattagggaacaagtcgatctttatctcgaaagtcaacaacag
aacgaagatgataacgaaggaaacgatgaggaagaagaagaggaagttgatgaagaagaa
gaagaagaaaccagcaatggcaagagtggtggtagcagaaaaagagggtcaaaaaaggag
aacaaagaggtgaagaaaaaagggggtggatttaccaagttatgtagtctttctccccaa
cttcaacaattcactggggtacccgaattagccaggactgaggttgttaaacaactttgg
atctacattcgagaacacaatctgcaagatccagccaataaaaagaacatactttgtgat
ggtccattacgtgaactctttggtgtggatagtatagacatgttccaaatgaataaggct
cttgcaaagcatatatggccgttgaattctgatggtgctccagtcagtttagcaccaaag
gaaaagccgcaaaagaaggaaagagaagaagattcagaagagccgaaaagaaaggagaag
cggcaaaagggtgctggtggttctggtattcttgctccaataccactttcagaagctcta
gtgaaatttctcggaacaggagaaaatgcattggcgcgttctgatgttgtgaagagaatc
tgggactacattaaacaaaataaccttcaggatccatccgacaaaagaagaatcttatgc
gatgacaagctgaaagaactctttgatgtcgacactttcaatgggttcacggtttcgaaa
cttttaaccactcatttcataaaagctgaaaggtga
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