Cynara cardunculus var. scolymus (artichoke): 112513359
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Entry
112513359 CDS
T05604
Name
(RefSeq) probable DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112513359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112513359
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
112513359
DNA repair and recombination proteins [BR:
ccav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112513359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
SAM_Ribosomal_mS41
ChaC
Motif
Other DBs
NCBI-GeneID:
112513359
NCBI-ProteinID:
XP_024975364
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All DBs
Position
LG 5:complement(30714558..30718181)
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AA seq
389 aa
AA seq
DB search
MAEPTEELRPKPPSFRSPPLSQPSPSPPPPSPSPLPSTDDPSSNSDRSRIPQTNPSKIPI
RPQKIRKLSSFASVDSATTLPEEIKXQSTIAEADASKAIILSTTTTTVVTKNRRRNPSQS
AKDLPKVIKPLSAPGEIAVALQHLRSHDPLIANLIDNHPPPTFDTHQSPFLALSKSILYQ
QLAYKAGTSIYTRFVALCGGEDAVVPETVLSLTSQQLKQIGVSGRKASYLYDLANKYKNG
ILSDESIVKMDDRSLFTMLSMVKGIGSWSVHMFMIFSLHRPDVLPVSDLGVRKGVQLLYS
LDELPRPSHMEQLCVKWRPFRSVGAWYMWRFVEGKGAQAAGASAVALESNSFPGQQQMGQ
SEQAQQQHQLQLLEPITNIGNLGACIWGQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccaacagaagaactcagacccaaacctccctcattccgatcaccccctctt
tctcaaccatcaccatcgccaccgccgccgtcgccgtctccactgccatcgaccgacgac
ccatcttctaattccgatcgctcccgaattccccaaacaaacccttccaaaatccctatt
cgtcctcagaaaatccgaaaactttcctcattcgcatctgttgattctgcaacaaccctc
ccagaagaaattaaacstcaatcaacaatcgctgaagccgacgcatccaaagccatcatc
ctttcaaccaccacaaccaccgtcgtaacaaaaaaccgtcgtcgaaacccttcacaatcc
gccaaagatttgcccaaagtaataaaacccttatccgcccccggcgagatcgccgtcgct
ctccaacacctccgatcccatgacccactcatcgccaacttaatcgataaccatccacca
ccgacattcgacacacaccaatccccctttttagccctatctaaaagcattctctatcaa
caactcgcgtacaaagccggcacatcgatctacacccgtttcgtcgccctatgcggcggc
gaagatgccgtcgtccctgaaaccgtcctctctctcacatcccaacagcttaaacaaatc
ggagtttctgggcgtaaggcaagttacctctatgacctagctaacaagtataaaaatggc
atcctttcagatgaatcaatcgttaaaatggatgatagatctcttttcactatgctttca
atggtgaaagggattggatcatggtctgttcatatgtttatgatcttttcacttcataga
ccagatgttttacccgttagtgatttgggggttagaaaaggagtccagcttctgtattca
ttagatgaattgcctagaccttcacacatggaacagttgtgtgtgaaatggaggccgttt
aggtcggtgggggcgtggtatatgtggcggtttgtggaagggaagggtgctcaggcggcc
ggagcctctgcggttgctttagagagcaatagttttccgggtcagcagcaaatggggcag
tctgaacaggcacagcagcaacatcaattgcagcttcttgaaccgattactaacatcggg
aatctcggggcgtgcatttgggggcaatga
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