Cynara cardunculus var. scolymus (artichoke): 112513423
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Entry
112513423 CDS
T05604
Name
(RefSeq) tRNA threonylcarbamoyladenosine dehydratase 2 isoform X1
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112513423
Transfer RNA biogenesis [BR:
ccav03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
112513423
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GFIT
Motif
Pfam:
ThiF
TrkA_N
Sacchrp_dh_NADP
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-GeneID:
112513423
NCBI-ProteinID:
XP_024975449
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Position
LG 5:complement(23938787..23957293)
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AA seq
481 aa
AA seq
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MEERAKSLALIAAGALLGSITATVAVLKLLPPRIATVQYSNGAKSNGEAVLSAPAAEGNS
SLKAEMYEIDHADLLKDEIVSEQLTRNIQFFGFDAQQKVTTSYVVVIGLGGVGSHAASML
LRSGVGRLLLVDFDQVSLSSLNRHAVATRIDVGTPKALCLKKHFSSIYPECHIDAKVLLY
DASSEEEILLGDPDFVLDCIDNIDTKGVHGNSLCTLGRWGRVKVALLAACVRRGLKVLSA
TGAGARADPTRIRVADLRESTNDPLSRAVRQRLRRDHGIEGGIPVVFSLEKPKAKLLPFK
GPNGDEENPSDYQVVPGFRVRIIPVLGTIPAIFGQIMASYVVTRLAELQVHMEPIVNFDM
DHYRVLHQRLIEHEELIYGTSIQVQVDVEEVMYVAKELWRGRSARDQTTKVGRGMWRSVN
ELMLVRWDKSKPASASNLILLKFTEADEHESTTLEDLKEHEPEFFTRVTSTLKRAELDLA
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagagctaagtctctggctttgatcgcagccggtgctcttttgggctccatt
actgccaccgtagctgttctcaagcttcttcctcctagaatagctacggttcaatacagt
aatggtgcgaaatcaaatggcgaagcagttttatctgctccagctgcagaaggcaatagt
tctctaaaagcagagatgtatgagatcgaccatgcagacctgttaaaagacgaaatagtt
tctgaacagctcaccaggaatattcagttcttcggttttgatgcacaacaaaaagtgaca
acatcctatgttgtagtcattggccttggaggggtcgggagtcatgctgcatcaatgctt
ttgagatcaggagttggcaggctcctccttgtagacttcgatcaggtttcactttcgtct
ttgaatcgacatgcggttgctacgagaatagatgttggcaccccaaaagcgttatgcctt
aagaaacacttctcatcaatttatccagagtgccacatagatgcaaaggtgctgttatat
gatgcttcttcagaagaagaaattctcttgggtgatcccgattttgttttggactgtatt
gataacatcgatacaaagggtgttcatggaaacagtctctgtacgttgggccgttggggt
agagtcaaggtggctcttcttgctgcatgtgtacgtaggggtctaaaagttttgtctgct
acaggagctggtgctagagctgacccaacgagaatccgcgtggctgatttgagagaatct
actaacgaccccctatctagagcagttagacaacgtttaaggagagatcatggtattgaa
ggtggcattcctgtagttttctctttggaaaaacccaaggcgaaactgcttccttttaag
ggacctaatggagatgaagagaatccttcagattatcaagtggtgcccgggtttagggtc
cgcataattcctgttttgggaacaatacctgctatttttggacaaatcatggcatcatat
gttgtgacaagactggcagaattgcaagtccacatggagcccattgtgaacttcgatatg
gatcattaccgcgttctacatcagcgccttattgagcacgaggagttgatttacggcacc
tccatccaagttcaggtagatgttgaagaagtcatgtatgttgctaaagagttgtggcgt
ggaagaagcgctagagatcaaacaacaaaagtagggcgtggaatgtggcgttctgtcaac
gagctgatgctcgtgagatgggacaaatcaaaacccgcatccgcatcaaatcttatcctt
ctaaaatttacagaggccgatgagcatgagtcgactacacttgaagatctaaaggaacac
gaaccagaatttttcacgagggtaacatccacactgaaacgagctgaattagacttggct
ctgtag
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