Cynara cardunculus var. scolymus (artichoke): 112513484
Help
Entry
112513484 CDS
T05604
Name
(RefSeq) transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03015
mRNA surveillance pathway
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112513484
09122 Translation
03015 mRNA surveillance pathway
112513484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112513484
Spliceosome [BR:
ccav03041
]
Complex A
Other components
Complex A specific factors
112513484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
112513484
NCBI-ProteinID:
XP_024975530
LinkDB
All DBs
Position
LG 5:complement(4275223..4281087)
Genome browser
AA seq
474 aa
AA seq
DB search
MSGYGHEGDGSAPPPVGGGYGGAGGGYGGSGGGYGGSGGGGGGYGGSGGGGGYGGGGRGG
GGGGGYGSRGGTGGREGGGGGGYGGNSQNRGGGGYQGGDRGRGGGRGGGRGSGRDGDWPC
PNPGCGNSNFSWRTECNKCGTPSPAGAGAGGDRGRNDGGSNNRGGGGRSDGGSYNRGGGG
GGYGGDRGGRGSYDGGSGGGSRGGGGSYGGNQGREGGGYGQGAAAGYGGSDSSYPQPPTS
YAANPAYGTDAVPPPASYNGGPTSYPPSYGGGAGYGGDSMPDNRGGGRGGPTGGYTSAPQ
NQGGYGGSPAEAPAKVKQCDETCDESCDNARIYISNLPPDVTVDELRELFGGIGQVGRIK
QKRGYKDQWPYNIKIYTDDQGNNKGDAALVYEDPSAAHSAGGFYNNYDMRGHKISVGMAE
KSAPRAPPAYGQGGGGGRGGGGGYGGGGGDRRRDNYRDGGPDRNYHGGNRSRPY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttacggtcacgaaggagatggatctgctccaccgcccgttggtggaggctat
ggtggagctggtggaggatacggaggtagcggtggaggttacggaggtagcggtggaggt
ggaggaggatatggaggcagtggcggaggaggcggatatggaggcggcggccgtggtgga
ggcggaggcggagggtatggtagtcgaggtggaactggtggtagagaaggaggtggtggt
ggaggatacggtggtaattcacaaaatcgaggtggaggtggatatcaaggaggagatcgt
gggcgcggaggcggtagaggtggcggacgtgggagtggtagagacggagactggccttgc
cctaatccgggctgtggcaattcaaacttttcttggagaactgaatgcaacaaatgcggt
accccctctcctgctggcgcgggtgccggtggtgatcgtggtcgcaatgatggtggcagt
aacaatagaggtgggggtggacgcagtgatggtggtagttacaataggggtggaggtggt
gggggatatggtggagatagaggaggtaggggtagctatgatggtgggagtggtggagga
agtaggggtggtggtggttcctatggaggcaaccaaggaagagaaggtggtggttatggt
cagggtgctgcagctgggtatgggggatctgatagtagttacccgcaaccacctacctca
tatgcggccaaccctgcttatggaactgatgctgtccctccacctgcaagctacaatggt
ggaccaacttcatatccaccatcctatggtggtggtgctggttatggtggtgattctatg
cctgataatcgtggtggtggaaggggtgggccaactggtggatataccagtgctccacag
aatcaaggtggttatggtggttctcctgctgaagcacccgcaaaggtcaagcaatgtgat
gaaacatgtgatgaatcctgtgataatgcgagaatctacatttcaaatttgcctccagat
gtgactgttgatgaactaagagagctatttggaggcattggacaagttgggagaatcaag
cagaagcgaggctataaggatcagtggccctataacatcaagatttacactgatgaccaa
ggaaataacaaaggagatgctgctttggtctatgaagatccttctgcagcacattctgct
ggcggcttctataacaattatgatatgagaggtcacaaaattagcgttggaatggctgag
aaatctgctccaagggctcctccggcatatggtcaaggcggtggtggtggaagaggtggc
ggcggcggctacggtggtggaggtggtgatagacgcagagacaactacagagatggtggt
ccagataggaattatcatggtggaaaccgttctcgtccatattga
DBGET
integrated database retrieval system
