Cynara cardunculus var. scolymus (artichoke): 112513627
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Entry
112513627 CDS
T05604
Name
(RefSeq) DNA repair protein RAD51 homolog 2
KO
K10869
RAD51-like protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112513627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112513627
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
112513627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_XRCC3_RpoA
ATPase
AAA_25
RecA_N
NACHT
AAA_22
AAA_24
Motif
Other DBs
NCBI-GeneID:
112513627
NCBI-ProteinID:
XP_024975721
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All DBs
Position
LG 5:complement(6150696..6155981)
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AA seq
369 aa
AA seq
DB search
MANKVIGEMGLPKSIGNIFAARNIITAKDALSLTEFELMELLDVDLAEVMCAVALISEIA
SPPYQTVQSLLEQRMQNEYLTGHLPTHLKGLDAALSGGIPFGALTELVGPAGIGKSQFCL
KISLLATLPSCYGGLDGHVIYIDVESKFSSRRLIEIGLNSFPEIFCLEGMAKEMAGRITV
LRPGSLTEFTESLQKIKFSILQQQVKLLVIDSMAALVSGEYEQGPPRQHPLGWHISLVKS
LAEFSRIPVVMTNQVRSRSTSEISQYSFQAESRVGVIEDTANFDSHLVAALGIHWAHAVT
IRLVLESRSGQRFIKVAKSPMSPPLAFPFEVTSSGILLLNDDGVEMTGPQINAIDHQGHS
DIICHRDER
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaaggtgatcggtgaaatgggtctgcccaaatccattgggaacatatttgct
gctcgcaatatcatcactgcaaaggatgcattgtcattgactgaatttgagttgatggaa
ttgttagatgtggatttggcagaagttatgtgtgcagtggctctcattagcgagattgct
tctccaccatatcaaacggtgcaatctctgctggagcaacgaatgcaaaatgagtatctc
acaggccatcttcccacgcatctcaagggtcttgatgcagcattatctggtggaatacca
tttggtgctttgacggagttggttgggcccgcaggaattggaaaatcacaattctgcttg
aagatttctcttttggctacactgccatcttgttatggaggcttggatggtcatgtaata
tatattgatgtagaatccaaatttagttcaagaaggttaattgaaattggtctcaatagt
ttcccagaaatattttgtttggagggcatggcaaaagagatggcaggtaggatcacagtt
ctacgaccaggttccttgaccgagttcactgagagcttgcagaaaatcaagttttcaatc
ctccagcagcaagtgaagttgctagtcattgatagcatggctgctcttgtttcaggggaa
tacgaacaaggacctccaaggcaacatccattgggctggcatatatcacttgtcaagtca
ctggctgaattttcaagaatacccgtggtgatgacaaaccaagtaagatctcgaagcacg
agtgaaatctctcagtattctttccaagcggagagcagggtcggtgttatagaagatact
gccaattttgattctcatcttgttgctgctttgggaattcactgggctcatgctgttacc
attcgtctagttcttgaatctagatcaggccaacgatttataaaggtggcaaaatctcca
atgtcgccacctcttgcattcccttttgaagttacttcatcggggatattattgcttaat
gatgatggagtagaaatgacaggaccgcaaataaatgcaatcgatcatcaaggtcacagt
gacataatttgtcatagggatgaaaggtga
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