Cynara cardunculus var. scolymus (artichoke): 112513669
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Entry
112513669 CDS
T05604
Name
(RefSeq) protein SHORT-ROOT
KO
K27743
protein SHORT-ROOT
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112513669
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Other transcription factors
GRAS
112513669
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GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
112513669
NCBI-ProteinID:
XP_024975776
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Position
LG 5:33051948..33053694
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AA seq
540 aa
AA seq
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MDTLFRLVSLQKQPSHHHHHHHHPLTNSTSRTNSNSSKSSNHHTTTPPFHFNYQQEEDQE
ECFNFFMDEEDFSSSSSRHHHHNQYYSSQQTPFHHQSSNTPTPTTSTTATPPPLSHYGAF
SSSEHQQSSDPNINYSYSPARDVTMEFSNSFTVNSWASDVLLEAARAVAEKNSGRLQQLL
WMLNELSSPYGDVDQKLSSYFLQALFSRMTDSGDRSYRTLLSASDKMCSFESTRKLVLKF
QEVSPWTTFGHVACNAAIMEAFDGESKLHIVDVSNTYCTQWPTLLEAIATRTDETPHLRL
TTVVATKLGGGATVSGSAVQKVMREIGNRMEKFARLMGVPFKFHVIHHTGDLSELNLSQL
GLQDDEALAINLNGTLRSVSNHRRDYLISTFRSLNPKIITIVDEEADLEVGTDGFEFVRG
FQECLRWFRVYFEALDQSFPKTSNERLMLERAAGRAVMDLIACSPAESMERRETAARWSS
RLHASGFGPVSYSDEVCDDVRALLRRYREGWSMNPSEAAAGIFLTWKETPVVWASAWKPI
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatactctctttaggcttgtcagcctccaaaaacagccctcccaccaccaccaccac
caccaccatcctctgaccaactccaccagcagaaccaattcaaacagttctaaatcatcc
aaccaccatacaaccactccaccatttcactttaactaccaacaagaagaagatcaagaa
gaatgcttcaactttttcatggatgaagaagatttctcttcttcttcctcacggcaccac
caccataaccagtactactcttctcaacaaacacctttccaccaccagtcttctaatacg
ccaactccgaccactagcaccaccgccactccgccaccgttgtcccactatggcgccttt
tcttcttctgaacaccaacagtcttctgatcccaatatcaactactcttactcgccggca
cgtgatgtcaccatggagttttcgaattctttcaccgtcaacagctgggcttccgacgtg
cttttggaggctgcacgtgccgtggcggagaaaaatagcgggaggttgcagcagctgctg
tggatgcttaacgagctgagctcgccgtatggagacgttgatcagaagctatcgtcttat
tttcttcaggcgctttttagtcgtatgacggattccggcgaccggtcttaccggacttta
ttatcggcgtcggataaaatgtgctcgtttgagtcaacgaggaaactggtgttgaagttt
caagaagtcagcccttggacgacgtttggacacgtggcgtgcaatgctgccatcatggag
gcgttcgacggcgagagcaaattgcatatagtagatgtaagcaacacttactgtacccaa
tggccgactttgcttgaagccattgcaacacgcaccgatgaaacaccacatctccgtctt
accacggttgtcgccaccaaattgggcggtggcgccaccgtttccggcagcgcagtgcaa
aaggttatgagagagatcggaaatcggatggaaaaattcgccagattaatgggtgttcct
ttcaaattccatgtaatacatcacaccggagatttatcggaattgaatttgagccaattg
ggtctccaagatgatgaagctcttgctattaacttgaacggcacgttacgttccgtcagc
aatcatcggagagattatttgatatcgacgttccggagtttgaaccccaaaatcatcaca
atcgttgacgaagaagctgatttagaagtgggtaccgatgggtttgaattcgtgagaggg
tttcaagaatgtttacgatggtttagggtttacttcgaagctctcgatcagagttttcca
aaaacaagtaacgaacggctgatgctggaaagggctgcgggacgagcggtgatggatttg
atagcatgctcaccggcggagtccatggagcggcgggagacggcggctcggtggtcaagt
aggctccatgcaagtggatttggtccggtttcttacagcgatgaagtgtgcgatgatgtt
cgagctctgctaagaaggtatagggaagggtggtcgatgaatccgtcggaagcggcggcc
ggaatattcttgacgtggaaagaaacgccggtggtgtgggctagtgcatggaagccgata
tga
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