KEGG   Cynara cardunculus var. scolymus (artichoke): 112513696
Entry
112513696         CDS       T05604                                 
Name
(RefSeq) uncharacterized protein LOC112513696
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112513696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112513696
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     112513696
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    112513696
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 RING_XB3-XBAT31 Baculo_IE-1 Prok-RING_4 zf-ANAPC11 zf-rbx1 DUF4666 Sina_RING
Other DBs
NCBI-GeneID: 112513696
NCBI-ProteinID: XP_024975805
LinkDB
Position
LG_5
AA seq 395 aa
MGDESPQNTMNLDLNLAPVVHPSQDDEPHTMSFEDWLHGSVSFEDWLHRPRSWQRLRSIW
RPVPIPMEARNMALGLTGSSGLVMDERNASDDERHPEMIKTDKNGDKNLENVDVGKKDVE
KSNGDESSFFDCNICLDLASEPVVTCCGHLFCWPCLYRWLFVHSEAKECPICKGEVTMKN
VTPIYSRGNHTHVTDVDSSVKIPSRPQAKRIESWRQSIQRNALNLPMFEMIRRLDNRSQE
IPNNSLLNRIFTSRGIRRGQDMAAIGSPDAVTDSPEFSPANTEPGGSTLLARRLNRPATV
TNLTSALSSAESFVDSYFRDHPDERNQEQLPLMDDRHSMSSIAAIIQSESQTADTATETD
SRVSISTSRRRYETSTSRVSDVDTGDSRSRRRRLQ
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgggggatgaatcgccacagaacaccatgaatcttgatcttaatttggcacctgtggtt
catccttcccaagatgatgagccacatactatgagctttgaagattggctacatgggtca
gtgagctttgaagattggctacatcgtcctaggtcttggcagcggttgcggtcaatttgg
agaccggttccaattccgatggaagctagaaatatggctctagggttaacaggtagcagc
ggtttggtaatggacgagagaaatgcttctgatgatgaacgacatccggagatgatcaaa
acagacaaaaacggtgataagaacttagaaaatgtggatgtgggtaagaaagatgtcgag
aagagcaatggagatgaaagcagctttttcgattgtaatatatgcttggatttggcgagc
gagcctgttgtgacttgttgtgggcacttgttttgttggccgtgtctttaccgttggctg
tttgttcactccgaagcaaaagaatgtccaatttgcaaaggggaagtaaccatgaagaac
gtaactcccatttacagccgtgggaatcacacacatgtaactgatgtggattctagtgtc
aagattcctagcaggccacaagcaaagaggatcgagagctggagacaatctattcagaga
aacgcacttaatctgccaatgtttgaaatgatccgaaggcttgataacagatcacaggaa
atcccaaataactcgttgctaaataggattttcacttctagagggatacggaggggacaa
gatatggctgcaattggatccccggatgctgtaacggactcaccagagttcagtccggct
aacaccgagccaggcggttcaaccctcttagcacgccggttaaaccgaccagctactgtg
acaaaccttacatctgctttaagttctgcagaaagttttgtggattcatatttccgcgac
caccctgatgagcggaaccaagaacaacttccattgatggatgatcgacattcaatgtcg
agcattgctgccatcatacagtcggaaagccagacagcagatactgcaactgaaacagat
tcaagggtgtcgatttcaacttcaagaagaagatatgaaacatcaacatcgagggtttcg
gatgttgacactggagattctcgatcccgaaggaggaggttgcagtag

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