Cynara cardunculus var. scolymus (artichoke): 112513751
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Entry
112513751 CDS
T05604
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112513751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112513751
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112513751
Pre-60S particles
112513751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
HEAT
Importin_rep_6
HEAT_2
HEAT_EF3_N
TOR1L1_N
MMS19_C
Vac14_Fab1_bd
Cnd1
IFRD
Adaptin_N
HEAT_Maestro
Arm
HEAT_GCN1
Htt_N-HEAT_1
TPR_TNPO3_IPO13_3rd
ARM_ARMC5
Phasin_2
Motif
Other DBs
NCBI-GeneID:
112513751
NCBI-ProteinID:
XP_024975878
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All DBs
Position
LG 1:22271843..22280357
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AA seq
1126 aa
AA seq
DB search
MASSDINRPTEIQFAQVAAVLGPDNSHFETLISHLMSAANEQRSQAETLFNLCKQNHPDT
LVLKLSQLLHSSPHAEARAMSAVLLRRILTISSDDESQSQTLYPSLSPATQLTLKSTLLE
SVSRESSKSISKKLCDTVSELASLVLPENGWPELLPFMFQCVTSGNPRHRESALLIFAQL
AQYIGETLVPHLDTLHAVFLGCLGTGTDPDVRIAALGASINFIQCLEKASDRDKFHDLLP
LMMQTLTEALNSGEESTAQEALELLIELAGTEPRFLRKQIAEVVGAMLQIAEAETLEEGT
KHLAVEFVITLAEARERAPGMIRKLPQFIKRLFEILMKMLLDVEDDPAWYSAEVEHEDAG
ETSNYSVGQECLDRLSISLGGNTIVPVISEILPAYLAAPEWQKHHAALIALAQIAEGCSK
VMTKTLEQVVSMVLNSFQDPHPRVRWAAINAIGQLSTDLGPDLQNQYHHLVLPALASAMD
DFHNPRVQAHAASAVLNFSENCTPELLKPYLDGIVGKLLVLLQNAKQMVQEGALTALASV
ADSSQENFQKYYDAVMPYLKTILVNAMDKANRMLRAKSMECISLVGMAVGKDKFKDDAKQ
VMDVLMLLQGSQLETDDPTISYMLQAWARLCKCLGQDFLPYMNVVMPPLLHSAQLKPDVT
ITSADSDADIDESDDESIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWI
DQVAPTLVPLLKFYFHEEVRKAAVSAMPELLRSAKLAVEKGQSQGRNESYVKQLSDYIIP
ALVEALHKEPETEICSSMLDAINECLQICGPILDESQVRSIVEEMKQVIMASSARRNERA
ERVKAEDFDAEEGEMLKEENEQEDELFDQVGDCLGTLLKIFKGPFLPLFDELLPYLMPMF
GKDVTAEEKRIAICIFDDVAEHCREAALKYYDTFLPFLLEACNDSSTDVRQAAVYGVGIC
AEFGGGAFRQFVGEALSRLDAVIRRPDALHPDNVMAYDNAVSALGKICQFHRDSINAAQI
VPAWLNCLPIKGDLIEAKVVHDQLCSMVERSDGELLGLNHQYLPKIVAVFAEVLSAGKDL
ASEQTVGRMINLLRQLQQTLPPSALASTFSSLQPQQQLALQSILSS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttccgatatcaatcgtcccaccgaaattcaattcgctcaggttgccgccgtc
ctcggccctgacaattctcactttgaaaccctaatctctcacctcatgtccgccgccaac
gagcagcgttcacaagccgaaaccctattcaatctctgtaaacagaatcatcctgatacc
cttgtactcaagctctctcaactccttcactcttctcctcacgctgaagcacgtgcgatg
tccgccgttcttctgcgtcgcatcctcaccatctcctccgacgatgaatctcaatcgcaa
acgctatacccttccctctcacctgccacccaattaacccttaaatccaccctgcttgag
tctgtgagtagagagtcctctaaatcaatctccaaaaagctatgtgatactgtttcggag
cttgcatcgttggttctgcctgaaaacggatggccggaacttttacctttcatgtttcag
tgtgttacttccggaaatcctaggcatagagaaagtgctttgttgatttttgcacaattg
gctcaatacatcggggagacattggttccacatttggacaccttgcatgctgtttttcta
ggatgtttgggtacagggacagatccagatgtgagaattgcggcattaggtgcttcaatc
aatttcattcagtgtttggagaaagcctccgatagggacaagttccatgatttgttaccc
ttgatgatgcaaacattgacggaagcattgaactccggtgaggaatccacggcacaggag
gctttagaattgctgattgagttggcaggtaccgaacccaggtttttaaggaagcaaatt
gccgaagttgtgggggcaatgttgcaaattgcggaggctgagactttagaagaagggact
aagcatttggcagttgagtttgttattactttggctgaagcgagggagagagcaccaggg
atgataaggaagttgccgcagtttattaagagattgtttgagatactgatgaagatgttg
ttggatgttgaagatgatcctgcttggtatagtgctgaggtcgaacatgaggatgcgggt
gagactagcaattacagtgttggtcaagaatgcttggacaggctttcaatttcattgggt
gggaataccattgttcctgttatttctgagattttgccagcctatttggctgctccagag
tggcaaaagcaccatgcggcactcattgcattagctcaaattgcagaaggttgctcaaag
gttatgacaaagaccttagagcaagttgtctcgatggtgttgaactcatttcaagatcct
cacccacgtgttaggtgggcggctatcaatgcaattgggcaactgtctacagacttgggc
ccagacttgcaaaaccagtatcatcatcttgtgcttccagcattagcttcagcaatggat
gatttccataatccgcgggtgcaggcacatgctgcttcagcagttctgaacttcagtgaa
aattgcacaccagaacttctaaagccttatttggatgggattgtgggtaaactacttgtt
ctgttgcagaatgctaagcagatggtgcaggagggggctttgactgctttggcatcagtt
gctgactcctctcaggagaattttcaaaagtattatgatgcagttatgccttacttgaaa
actatactggtgaatgcaatggacaaagctaatcgcatgctacgtgccaaatctatggag
tgtattagtttggttggaatggctgttggaaaagacaagttcaaggatgatgcgaagcag
gttatggatgttctcatgttactgcaaggttcccaactagagacggatgatccaacaata
agctacatgttgcaagcgtgggcaagactctgcaaatgcctagggcaggatttcctccct
tacatgaatgttgtcatgccacctttgcttcattctgctcagcttaaacccgatgttacc
attacatctgctgattcagatgctgatattgatgaatcggatgatgaaagcattgagact
atcacgcttggagataagagaatagggatcaagactagtgttcttgaggagaaagctaca
gcatgcaacatgctatgttgttatgctgatgagttaaaggaagggtttttcccctggatt
gatcaggttgctccaacattagtaccacttcttaaattttattttcatgaagaagttaga
aaggctgcagtttcagctatgccggagcttcttcgttctgcaaagttagctgttgagaag
gggcaatcccagggccgcaacgagtcctacgtaaagcagttatctgactatatcatacca
gctttagtagaagctttacacaaggaaccagagactgaaatttgctcaagtatgctggat
gctataaatgagtgcttacagatttgtgggcccattttagatgaaagccaagttagaagc
attgtggaagagatgaaacaggtaattatggccagttcagctagaagaaatgaaagagca
gaaagagtcaaagcagaagactttgatgcagaagagggagaaatgctgaaggaagaaaac
gagcaagaggatgaacttttcgatcaagttggtgattgtttgggcactctactaaagatc
tttaagggcccatttctgcctctttttgacgaactattgccttacttgatgcctatgttt
ggcaaggatgtgacagccgaggagaaaagaatagccatttgcatatttgatgatgttgct
gagcattgtcgagaggcagctctaaaatattatgatacttttctaccattcctgttggaa
gcatgcaatgattcaagcaccgatgtccgccaggctgctgtttatggggttggcatatgt
gcggagtttgggggaggtgcattcagacaattcgttggtgaggctctttctagattggat
gctgtcatcagacgccctgatgcattacatccagacaacgtaatggcatatgacaatgct
gtttcagctcttggcaagatatgccaattccatcgcgatagtattaatgctgctcagatt
gttcctgcatggttaaactgcctgccaataaaaggcgacttgattgaggcgaaagttgta
catgatcagctttgctcaatggtggaaagatctgatggagaactattagggcttaatcat
cagtatcttccgaagatagttgcagtatttgcagaggttctttctgctggtaaagatttg
gcatctgaacaaacagttggccgaatgatcaatctgctgaggcagcttcagcaaacatta
ccgccatctgcgcttgcatcaaccttttcatctttacaacctcaacaacagcttgcgctt
caatcaatcctttcttcctaa
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