Cynara cardunculus var. scolymus (artichoke): 112513766
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Entry
112513766 CDS
T05604
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112513766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112513766
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112513766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
112513766
NCBI-ProteinID:
XP_024975895
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Position
LG_5
Genome browser
AA seq
843 aa
AA seq
DB search
MADTNRKKANRSKGAKEKRWKKGPHLPNSLKKELHSLNPTHDQPIQSDDDIDVYEYEETI
PDEDSKKNRRYDPVDNFEYQLPKDFEDEDVASDDEEEEEEEEEEGPQKGDSDEDDDGKHV
RMLQGITGLPGDAFEGKKKKKNDVVIFEAYPESEYNPSRDVLDGDGRITVDDLLNPLHGK
PGFSKJRKDVQRMDRKSVSIQPPLPKPQQEKVDRRSTFVYSKKKLSEYEALVKKNREAPT
IYFDEDIDVGYSTVGAIASEFRPRTEFEKKMDSLINAKELSEAHKGDGARLLELNKISXE
DVKERQDRLAKMRNLLFRHELKSKRIKHIKSKTYRRLLKKDKSKAAATEIEMNPEAAKEL
AEKQEFKRAEERLTLKHKNTSKWAKRIKKRGFDVQDDGTRAAISEQLQQHALLTRKRDSM
HDNSSSSSDDSTEEEDDDISGDEDDASKLKLLDIGKKRTLEVLDEDDEMPKSGVLSLPFM
VRGQKKKKEAADEEARLALQDFDSSLKQLEGDDDDVKGNVGFLSGRKVFGAQKKQVPKSK
AKVNNTDNYFDNTDSEDDADIIEDVNDKHGRMNYTQKDVNIDPNILREESEIEHDSLFKN
FDYISKDSGPKITYEVSLSATNSTKKKRNMKDSNQAKSEKKAKIKKSQVAELASDKDTAI
EHGEDDIDSDGETRMVDGIITSGTDYELPSQDDLIRRAFAGDDVEDDFEXSKQEIMNEEN
PEPEKPVVLPGWGQWTHIQKKRGLPSWMLGEHERAKKKRDEDLKKRPDAHLKHVIISEKV
DKKAEKLQTRTLPYPFKDKEHFERSNRMPLGPEFNPATTIGALNRPEVVKKPGVRIKPIK
LRK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccaacaggaagaaagccaacagaagtaaaggagctaaagagaagagatgg
aaaaaaggtccccatttacctaactccttgaaaaaggaactccattccttaaaccctaca
cacgaccaaccgatccaatccgatgacgacattgacgtctatgagtacgaagaaacaatc
ccagacgaagactccaagaagaaccgcaggtacgaccccgttgataacttcgaataccaa
ctccccaaggattttgaggatgaagatgtggcatctgatgatgaggaggaggaggaagaa
gaagaagaagaggggccccagaagggagatagtgatgaggatgatgatgggaagcatgta
cggatgttacaaggtatcactggactgcctggcgatgcttttgaaggcaagaagaagaag
aaaaatgatgttgtaatttttgaggcatatccagagtctgaatataatccgagccgtgat
gtcttggatggtgatgggcgcattactgttgatgatcttttgaatccccttcatgggaaa
ccaggattcagcaaamttagaaaagatgtgcaacggatggatagaaagtccgtttccata
cagcctcctcttccaaaaccacaacaagagaaagtggaccggaggagtacttttgtttat
tcaaagaagaaacttagtgaatacgaagcattagtaaagaaaaatagagaagcgcctacc
atttactttgatgaagatatagatgttggttattccactgtaggggcaatagcttctgaa
tttaggcccaggactgaatttgagaagaaaatggattctttaataaatgctaaagaactt
tcagaagctcataagggagatggtgcaaggcttttggaactgaataagatatctrtagaa
gatgtgaaggaacggcaggaccgtcttgcaaaaatgcgtaatcttctatttcgacatgaa
ctaaagtcgaaaaggattaaacatataaagtccaaaacatatcgccgtttgttgaagaaa
gataaatcaaaagcggcagccactgagattgaaatgaatcctgaagctgctaaagaactt
gcagagaagcaggaatttaagagggctgaggaacgcctgactctaaagcacaagaatact
tctaaatgggctaagcgcatcaagaaacgtggttttgatgtccaagacgatggaacacga
gctgctatatcagaacarcttcagcaacatgctcttttaactcgaaaaagagattccatg
catgataacagtagtagtagtagtgatgacagcacggaggaggaggatgacgacatctca
ggagatgaggacgatgcatccaaattaaaattgttagatattgggaagaagaggacactt
gaagtgttagatgaagacgatgaaatgcctaaatcaggagtcctttccttacctttcatg
gttcgggggcagaagaagaaaaaggaggcagcagatgaagaagctaggcttgctctacaa
gattttgattcatcattgaagcagttggagggtgatgatgatgatgtcaaaggcaatgta
ggtttcttgagtggtagaaaggtatttggtgctcaaaagaaacaggttccaaagtccaag
gctaaggttaacaacacagataattactttgacaatacggacagtgaagatgatgctgac
atcatagaagatgttaatgataaacatggcagaatgaattatacacagaaagatgtcaat
atcgaccctaatattcttcgagaggagtcagagattgagcatgattcattgtttaagaac
ttcgattatattagcaaagattcagggcccaagattacatatgaagtttccctctctgca
accaactccacgaaaaagaagaggaatatgaaagattctaatcaggccaaaagtgagaaa
aaagcaaaaatcaagaagtcacaagttgcagaattggcctctgacaaagatacagccata
gagcatggagaggatgatatcgattcagatggtgaaactcgaatggtagatggaattata
acatctgggacagattatgaattgccatcacaagatgatctaataagacgtgcttttgcg
ggtgatgatgtggaggatgattttgagaygagtaagcaggagattatgaatgaggaaaac
ccagaacctgaaaagcctgttgtacttcctgggtgggggcartggacccatatacagaaa
aaaagagggttgccatcttggatgttgggagaacatgaaagagccaaaaagaagagggay
gaggatcttaaaaaaagaccagatgcacatcttaagcatgtgattatatcagaaaaggtt
gataaaaaggctgaaaaattgcagacaaggacgttaccgtatccattcaaggataaggag
cactttgaacgtagcaaccgtatgcctcttggtccagaattcaaccctgcaacaactatc
ggggcacttaatcgacctgaagtggtgaagaaacctggtgtgaggataaaaccaatcaag
ttaaggaagtaa
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