Cynara cardunculus var. scolymus (artichoke): 112513801
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Entry
112513801 CDS
T05604
Name
(RefSeq) probable vacuolar amino acid transporter YPQ2
KO
K23678
solute carrier family 66 (lysosomal lysine-arginine transporter), member 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112513801
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112513801
Transporters [BR:
ccav02000
]
Solute carrier family (SLC)
SLC66: Lysosomal lysine-arginine transporter
112513801
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PQ-loop
DUF6105
Motif
Other DBs
NCBI-GeneID:
112513801
NCBI-ProteinID:
XP_024975932
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Position
LG_1
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AA seq
383 aa
AA seq
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MSLLLGNGSNSSNPLSSYCVQENKPCIGWWVDEYFKDCLCNLKDQISFGLGIISLVCWGV
AEIPQIITNFRTKSSHGVSLIFLLTWIAGDIFNLVGCLLEPATLPTQYYTAMLYTTSTVI
LVLQSLYYDHIYAWLKSRKADANASPEVEETKKPLKPAAILNSQSRAIKASPSQRPNYYY
MSARSMAGSSTPPFRGCLWTTRSGPASAMAAENDSSSEDESSVEIPKTASQPRPIPRSVG
YGAFFGASLNMPSQAKGLVQVYAYRQLLQDGGGGKSVYGQWLGWMMAAIYMGGRIPQIVL
NVKRGSVEGLNPLMFVFALVANATYVGSILVRSTEWERIKANMPWLLDAAACVALDAFII
MQYVYYRYFFLKQRLPNSHHEVY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgttgttggggaatggtagcaatagcagtaacccattatcatcgtactgtgtt
caagaaaataaaccatgtattgggtggtgggttgacgagtatttcaaagattgtctctgc
aatctcaaggaccaaatctcgttcggattgggaattataagccttgtttgttggggtgta
gctgaaatccctcagattatcaccaacttccgtactaaatccagccatggcgtctctctt
atcttcctcctaacatggattgcaggggatatctttaatcttgtgggttgtcttctggaa
cctgcaacattgcccacacaatactacactgctatgctttacacaacaagcacagtcatc
ttggtgttgcagagcttgtactatgatcacatctatgcatggttgaaatctcggaaagcc
gatgcaaatgctagtccagaggtggaagaaactaagaaacccctcaaaccagctgccatt
ttaaattcgcaaagtcgtgccatcaaagcatccccatctcaacgcccgaactactattac
atgtcagcaagatcaatggctggaagttcaactccaccttttagaggttgtctatggaca
acaagaagcggcccagcctcggctatggctgctgaaaatgattcttcttcagaagatgag
tcatcggttgagataccaaagactgcttcccaacctaggccaataccacgctctgtgggt
tatggagcattttttggtgcttcactgaatatgccttcacaggccaagggtttggttcaa
gtttatgcttacaggcagcttctacaagatggtggtggtggaaaaagtgtgtatggccaa
tggctgggctggatgatggctgctatatacatgggcggtcgcattcctcaaattgtgtta
aatgtgaaaagaggcagtgttgagggtttgaatcctctcatgttcgtgtttgcactcgtg
gccaatgcaacttacgttggaagcattcttgtaagaagtacagaatgggagagaattaaa
gcaaacatgccgtggttgctggatgctgcagcctgtgtggcactcgacgctttcatcata
atgcagtacgtctactacagatacttcttcctgaagcagcgacttccaaacagccatcat
gaggtctactag
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