Cynara cardunculus var. scolymus (artichoke): 112513939
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Entry
112513939 CDS
T05604
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112513939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112513939
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112513939
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
112513939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Prok-RING_4
YpzI
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112513939
NCBI-ProteinID:
XP_024975993
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All DBs
Position
LG 1:complement(8975751..8978142)
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AA seq
307 aa
AA seq
DB search
MAPGGNIYQDVAESRAALADYGVKSANVEGRNGPRLCGSAGGRPGMASNSAVHELLECPV
CLNVMCPPIHQCPNGHTICVVCKSKVQNSCPICRQELGNIRCLALEKVAESIELPCKYHF
YGCLDILAYHSRMRHEENCKYRGYNCPYAGAECLVTGDISFIVAHLKADHNVDMHDGYSF
NHRYVKPNPHEIENATWMLTIFNCFGYQFCLHFEAFHLGTAPVYMAFLRFMGDENDANKF
SYSLEVGGNGRKLKWQGIPRSIRDSHKSVRDSLDGLIITRNIALFFSGGDRQELKLKVSG
RIWKEQS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggtaacatataccaggatgtcgctgaatcgcgtgctgcacttgctgat
tatggtgtcaaatctgcaaatgttgaaggaagaaatggccccagattatgtggttctgcc
ggtggaaggccaggaatggcatcaaacagcgctgtgcacgagctacttgagtgccctgtg
tgcctgaacgtaatgtgtccgcccattcatcagtgtccaaatgggcacacgatatgtgtt
gtttgcaagtctaaagtgcagaatagttgtccaatatgtcggcaagagcttggaaacata
aggtgtttggcgttggagaaagttgcagagtcgattgagttgccttgcaagtaccatttt
tacgggtgccttgatattttggcgtatcacagcaggatgaggcacgaggagaattgcaag
tatcgtgggtataattgtccgtatgcaggtgcagaatgcttggtaacgggtgatatttcg
ttcatcgtggcacatctgaaagcggatcataatgttgatatgcatgatgggtatagcttc
aaccaccgatacgtgaagcccaatcctcatgaaatcgagaacgctacctggatgttaact
atattcaactgtttcggataccaattctgcttgcattttgaagcatttcatctgggaaca
gcaccggtttacatggcgttcttgcgtttcatgggggatgaaaacgatgccaacaagttc
agctacagccttgaggttggaggaaatgggagaaagttgaaatggcaggggattccgaga
agcattcgtgacagtcacaagagcgttcgtgatagtctcgatgggctgatcataactcgg
aatatagcgctcttcttttcgggcggagatcggcaggaactgaagctcaaagtgtcaggg
aggatatggaaagaacagtcttga
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