Cynara cardunculus var. scolymus (artichoke): 112513998
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Entry
112513998 CDS
T05604
Name
(RefSeq) heat shock cognate 70 kDa protein 2-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040
Spliceosome
ccav04141
Protein processing in endoplasmic reticulum
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112513998
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112513998
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112513998
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112513998
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112513998
03009 Ribosome biogenesis [BR:
ccav03009
]
112513998
03110 Chaperones and folding catalysts [BR:
ccav03110
]
112513998
04131 Membrane trafficking [BR:
ccav04131
]
112513998
03051 Proteasome [BR:
ccav03051
]
112513998
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112513998
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112513998
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
112513998
Spliceosome [BR:
ccav03041
]
Complex B
Other components
Prp19 complex
112513998
Complex C
Prp19-CDC5 complex
112513998
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
112513998
Chaperones and folding catalysts [BR:
ccav03110
]
Heat shock proteins
HSP70 / DNAK
112513998
Membrane trafficking [BR:
ccav04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112513998
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
112513998
Proteasome [BR:
ccav03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
112513998
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
112513998
Exosome [BR:
ccav04147
]
Exosomal proteins
Proteins found in most exosomes
112513998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
112513998
NCBI-ProteinID:
XP_024976042
LinkDB
All DBs
Position
LG 1:4615807..4619722
Genome browser
AA seq
643 aa
AA seq
DB search
MVGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFTDSSVQSDMKLWPFKVIPGPADKPMIVVTYKGENKEFAA
EEISSMVLTKMREIAEAYLGTSIKNAVVTVPAYFNDSQRQATKDAGAIAGLNVMRIINEP
TAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFRRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNQKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQI
NVCFDIDANGILNVSAEDKAGGQKNKITITNDKGRLSKEDIEKMVQEAEKYKAEDEEHKK
KVEAKNALENYAYNMKNTIKDDKIASKIPADDKKKVEDAVEQAVQWLDSNQLAEAEEFED
KMKELEGICNPIIAKMYQGEGMGGVPDMGADGSGEGPKIEEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaaaaggtgaaggaccagcaattggaatcgatctaggtacgacgtactcgtgc
gtcggggtatggcaacatgatcgtgttgagataattgctaatgaccaggggaacaggaca
acgccgtcttatgttgcttttactgatactgaacgtctgatcggtgatgctgctaagaat
caagtcgcgatgaatcccatcaataccgtttttgatgctaagcgattgatcggcagaaga
tttactgattcttctgtacagagtgatatgaagctatggccgttcaaggtcattcctggc
cctgcagacaagccaatgattgttgttacttataaaggagaaaataaggaatttgcagca
gaggagatttcttcaatggttctcacaaagatgcgggagattgcagaggcttatcttggc
acctccatcaagaacgctgttgtcactgtccctgcttacttcaatgactctcaacgtcaa
gctacaaaggatgctggtgcaattgctggtctcaatgtgatgcggataatcaatgagcca
acagctgcagctattgcatatggtcttgacaagaaggcaacttcttctggggagaaaaat
gtgcttatttttgaccttggtggtggtacttttgatgtttcccttctcaccattgaagag
ggtatttttgaagtgaaggctacagctggtgacactcacctaggaggtgaagacttcgac
aacaggatggtgaatcactttgtccaggaattcagaaggaagaacaagaaagatattagt
ggaaacccaagggccctcagacgattgaggacttcatgtgagagagcgaagaggactctc
tcttctaccgctcaaacaaccattgagatcgattctctgtttgaaggtattgatttctat
tcaaccatcacccgtgcccgatttgaggagctcaacatggatcttttcagaaaatgtatg
gagcctgttgagaagtgtctgagagatgccaagatggacaagagcactgtccatgatgtt
gttctcgtaggtggatctaccagaatcccgaaggtacaacagcttttgcaggacttcttt
aacggaaaggagctttgcaagagcatcaatcccgacgaggctgttgcttatggtgctgct
gtccaagctgctatattgagtggtgaaggtaaccagaaggtgcaagacctcttgcttttg
gatgtgactccattgtcccttggtttggagactgctggtggagtcatgacagtgctcatt
ccaaggaatactacaattcccaccaaaaaggagcaaatattttcgacctactctgacaat
caacctggtgttctaattcaagtttacgaaggggagagagcaagaactagggacaacaac
ttgttggggaaatttgaactttctggcattcctcctgcacccaggggtgtcccccaaatc
aatgtctgctttgacattgatgcaaatggcatcttgaacgtctctgctgaggataaggct
ggtggtcagaagaacaagatcaccataaccaacgataagggaaggctgtcaaaggaggac
attgagaagatggtacaagaagctgagaaatacaaggcagaagacgaggagcacaagaag
aaagtggaagcaaagaatgcgctcgagaattatgcatacaacatgaagaacaccattaag
gatgacaagatagcctcgaagattcctgcagatgacaaaaagaaggtggaggatgctgtt
gagcaggctgtgcagtggttggattcaaatcagcttgcagaggcagaggaatttgaagac
aaaatgaaggagctggagggtatctgtaaccctattattgctaagatgtatcaaggtgag
gggatgggtggtgtccctgatatgggtgctgatgggagcggtgaaggtcccaaaattgaa
gaagttgattaa
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