Cynara cardunculus var. scolymus (artichoke): 112514015
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Entry
112514015 CDS
T05604
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ccav03110
]
112514015
Chaperones and folding catalysts [BR:
ccav03110
]
Heat shock proteins
HSP100
112514015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
TniB
AAA_14
AAA_28
NBD_SMAX1
NACHT
AAA_18
Zeta_toxin
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
DISC1_C
Motif
Other DBs
NCBI-GeneID:
112514015
NCBI-ProteinID:
XP_024976059
LinkDB
All DBs
Position
LG_6
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AA seq
922 aa
AA seq
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MAGALVQSTSFTSAVSGESEVRSKRSGSIKRPVKMMGLQAPSVRVRTFSGLRGVNALDNL
VKRGQDFHSKVAAATSVRRAKPSRIVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTE
QILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELS
LEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPNNIRTQVIRMVGESAEAVGA
GVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGE
PGVGKTAIAEGLAQRIATGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIK
QSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPA
LERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALVAAAQLSYQYISDRFLPD
KAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDL
KTQISALVDKNKEMSKAETEAGEEGPMVTEADIQHIVSSWTGIPVEKVSTDESDRLLKME
ETLHTRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALATYYF
GSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAH
PDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDS
SYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIE
LQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSEG
NVTVLNGSSGAPPEALPEPIPV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctggggctttggtgcaatccaccagttttacttctgcagtttccggtgaaagcgag
gtccgttcaaagcgatctggtagtataaaaagaccagtcaagatgatgggcttacaagct
ccttcagtgagggttaggaccttctctggtttgcggggagtaaatgctttagacaacttg
gtaaagagaggccaggatttccactcaaaggttgcagcagccacctctgtccgaagagca
aaacctagtcgaattgtgccaaaggccatgttcgagcgcttcacagagaaggctatcaaa
gttattatgcttgcacaagaggaggcaagacggcttggtcacaattttgtgggtacggag
cagattttattaggtcttattggtgagggcactggcattgcagcaaaggtgcttaagtca
atgggaattaatttgaaagatgcacgtgttgaggtagaaaaaattattggtaggggtagt
ggatttgttgctgtagagattccatttacacctcgtgcaaagcgtgtactggaactatca
ctagaggaggcccggcaacttggtcataattacattggttcagagcacttgcttcttggt
ttgcttcgtgagggggaaggtgtagcagctcgcgttcttgagaatttaggtgcagaccca
aataacattcgcacacaggtgatcagaatggttggcgagagtgcagaagctgtgggtgct
ggagttggtggtggaagctccggaaacaagatgccaacactggaggaatatggtaccaac
ttgacaaagctagcggaggagggtaagctggatcctgttgtaggaaggcagccacaaatt
gaaagagttactcaaattctgggacgccgtacaaaaaacaatccctgcctgattggagaa
cctggtgttggaaagacagcgattgcagaaggtcttgcccaaagaattgcaactggtgat
gttccagaaacaattgagggaaagaaggtgattactctggatatgggtctgcttgttgct
ggcacaaagtatcgtggagagtttgaggagagactaaagaagctcatggaggaaatcaag
caaagtgatgaaattattctctttattgatgaagtccatacattaattggagcaggagca
gcagagggggctattgatgctgctaacatcttgaagcctgctcttgccagaggtgaatta
cagtgtattggggcaacgacccttgatgagtaccggaagcatatcgagaaggacccagca
ctggagagacgattccagcctgtaaaggtgcctgagccgacagttgatgagactatacag
attttgaaagggcttcgagaacgatatgagattcaccacaaactccgttacaccgatgaa
gcacttgtagctgctgcccagttgtcatatcagtacataagtgaccgttttcttcctgat
aaagctatcgatttaattgatgaagctggttctcgtgttcgacttcgtcatgcacaactt
ccggaagaagccagagagcttgagaaagagcttaggcagataacaaaagagaagaatgaa
gcagttcgcggccaggactttgaaaaggctggggaattgcgtgatcgagagatggatctc
aagactcagatatcggctcttgtggataagaacaaagagatgagcaaggccgagacagag
gcgggagaggaaggcccgatggtaacggaagcagacattcaacacattgtctcgtcttgg
acaggtataccggtcgagaaagtctcgaccgatgaatccgaccgcctcctcaagatggaa
gagactctccacacacgaatcatcggtcaagatgaagctgtcaaagctattagtcgtgcc
attcgtcgtgcccgtgttggactaaagaaccccaaccgccccattgccagtttcatcttt
tctggacccaccggtgtcgggaagtctgaacttgctaaagcgttggctacttactatttt
gggtcagaagaagccatgattcggctcgacatgagtgagttcatggagaggcacaccgtc
tcaaagctcatcggttcacctcccggttacgttggttacaccgaaggtggtcaattgacc
gaggccgtgcgtcgccgtccctacaccgttgtgctattcgacgaaatcgagaaagctcac
cctgatgtcttcaacatgatgcttcaaatcctcgaagacggaagattgaccgacagcaaa
ggaagaaccgtggacttcaagaacacgcttctaatcatgacatcaaacgtcggaagtagt
gtaatcgagaagggtggccgaaggattgggttcgacctcgactatgacgagaaggacagc
agctacaaccgaatcaagagcctggtcaccgaggaactgaaacaatatttccgcccggaa
ttcttgaacagactcgacgagatgatcgtattccgacagttgaccaaacttgaggtcaaa
gaaatcgctgacataatgttgaaggaagtctttgagaggctaaaggttaaagaaatcgag
cttcaagtaaccgagcgattcagggatcgggtcgtggaggaaggatacaacccgagctac
ggtgcaaggccgctgagacgtgcaatcatgaggctactggaagacagcatggcggagaag
atgcttgcacgtgaaatcaaggaaggcgattccgtgatcgtggatgtcgattctgaaggg
aacgtgaccgttctcaacggcagcagcggagctccgccggaggcattgccggagccaatt
ccggtgtag
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