KEGG   Cynara cardunculus var. scolymus (artichoke): 112514127
Entry
112514127         CDS       T05604                                 
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
  KO
K12831  splicing factor 3B subunit 4
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112514127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccav03041]
    112514127
Spliceosome [BR:ccav03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112514127
 Complex B
    112514127
 Complex C
   U2 SnRNP specific factors
    112514127
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 112514127
NCBI-ProteinID: XP_024976227
LinkDB
Position
LG_6
AA seq 228 aa
MDDLLATLTFIYVFDSSVSFLSLFDANFSPFFLLLQCPPTLVALFTLESFIGCLLHKGDP
SAEQCNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDRPKGFAFAEYETKEIADYAVKL
FSGLVTLYNRTLRFGISGQDKSAPNTQASTLASNSPFKSRLNVEVSPSSLSQYTQVSPGA
VQLSNVNRSQMDHNNYDHRRGHGATWDGTNLSTSNRYDTSNPKHHDRY
NT seq 687 nt   +upstreamnt  +downstreamnt
atggatgacctcttggcaacgctgacttttatctacgtcttcgactcttcggtgtctttt
ctctctctcttcgacgccaatttttcccccttcttcctgcttctgcaatgtcctccaacc
ctagttgcactgtttacattggagtcatttattggatgtttgttgcataaaggagaccct
tctgcagaacaatgtaacttggatgaacgagtaagtgatcgggttttatacgatatccta
atacaggctggtcgggtggttgacttgcacattcctcgagacagggaaactgatagacca
aaaggttttgcttttgcagaatatgaaaccaaggagattgctgattatgctgtgaagctg
ttttctggccttgtgactctttacaaccgaactttgagatttggaatttctggccaagac
aaatctgcaccaaacacacaagcttcaacgcttgcatcaaattctcctttcaaatcaagg
ctaaatgtagaggtttctccgagctctttgtcacaatatacacaagtttcacctggtgcg
gtacaattatctaatgtaaatagatcacagatggatcacaacaattatgaccatcgaaga
ggtcatggggcaacttgggatggtaccaacctttctacgtcaaaccgctatgatacaagt
aacccaaaacatcatgatcgttattaa

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