Cynara cardunculus var. scolymus (artichoke): 112514278
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Entry
112514278 CDS
T05604
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112514278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112514278
Membrane trafficking [BR:
ccav04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112514278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_17
TPR_16
TPR_8
TPR_14
TPR_19
TPR_7
TPR_9
TPR_12
PPTA
TPR_20
NGF
Motif
Other DBs
NCBI-GeneID:
112514278
NCBI-ProteinID:
XP_024976399
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All DBs
Position
LG 6:complement(15680321..15692034)
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AA seq
742 aa
AA seq
DB search
MAMRELVTGGAACAVPGSSSSSNPLGAFANALIGSSSQKERLQEIPTSTLNTSGNNLYSG
AGEPLSALPGAESEQHLQHESKGSEFVSGFHAANDNRLADVWDGIQNPQIPHFPGREGQT
TFPLGHPQLQPELNGPPQRVLSSFLHSFVNSSHGGVPFGPTQLPILGLSEGDKRCIRDRS
SIMARHFFADKSEDFINGQVNALLSSLEIDNHALARGHISGRHSELEQYWNEPQIMTPGP
HTGDGWADEFAQHRVGQGDPNAWALSFERQHGAGGWASEFEHEQAQMTSVGRMAGANIPS
LAAMEQTRMLAHTLAQNSNPKFQNSKFLQFVSKMSRGELTIEDNQVKPASGDWANEYQQQ
YNAGPSSWADQYAHEEISRGPDRWADDFAAERAHHGPVDEQWVNEFSKLQVNDWADEFGR
QVGEGVLGDDSADNWASAYDEYLNEQAVVKQKSDASRGVYVFSDLNPYVGHPDPLREGQE
LFRKGLLSEAVLALEAEVLKNPENAEGWRLLGVAHAENDDDQQAIASMMRAQEADPTNLE
VLLALGVSHTNELEQQAALKYLYSWLRHHPEYGKIAPPELSDSLYYADVARTFNEAAQMS
PEDADVHIVLGVLYNLSREYDKAIESFQTALKLKPRDYSLWNKLGATQANSVQSADAIYA
YQRALDLKPNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYLRISLSCAS
RNDMMEACDSRNLDVLQKEFPL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagggagttggtgacgggtggggccgcctgtgccgtacctggatcttcttct
tcttcaaaccctctcggtgcttttgccaacgcccttatcggctcttcctctcaaaaggaa
aggttgcaggagattcctacatcaacactaaatacttctggcaacaatctttactccgga
gcaggagaacccttgtcagcccttcctggtgccgagtcggaacaacatctgcagcatgag
agcaagggctcagagttcgttagtggtttccatgctgctaatgacaacaggcttgctgat
gtttgggatggaatacaaaatcctcagattcctcatttccctggaagagaaggtcaaacc
accttccctctagggcatccccagcttcaaccagaattaaatggtccacctcaaagagtt
ttgtcaagttttttgcattcatttgttaacagcagtcatggtggagttccttttggtcct
actcagctgccgatattggggttgtctgaaggggacaaacggtgcatacgtgaccgcagt
agcattatggctcgacatttctttgctgacaagagtgaggatttcatcaatgggcaggtg
aatgctcttttatcgtctttagaaatcgataatcatgccttggctaggggacacatctct
ggacgacactcagagctggaacaatattggaatgagcctcaaatcatgacgcctggacca
catactggagatggttgggctgatgaatttgctcaacacagagtaggacaaggagaccct
aatgcttgggcgctatccttcgaacgacaacatggtgctgggggttgggcctctgaattt
gagcatgagcaagctcagatgacgtctgtgggtcgaatggcaggtgcaaacattccatct
ttggctgctatggagcagacccgtatgctagcacacactttagctcagaacagcaatcct
aaatttcagaactcaaaattccttcagtttgtttcaaagatgagccgtggggaattgacc
attgaagataaccaagtcaagcctgcaagtggtgactgggcaaatgaatatcaacagcaa
tataatgcaggcccttcttcttgggcagatcagtatgcacatgaagagatttctaggggt
cctgataggtgggcggatgactttgctgctgaacgtgcgcatcatggtccagtagatgag
cagtgggtcaatgaattttccaagttgcaagtcaacgactgggcagatgaatttgggcgt
caagttggtgaaggagttctgggagatgattctgctgataattgggcaagtgcatatgat
gagtacttaaatgagcaagctgttgtcaagcagaaatctgacgcctcaaggggagtctat
gtcttctctgatctaaatccttatgttggccaccctgatcccctgagagaaggtcaggag
ctgttccgtaaaggtcttctaagtgaagcagttcttgctttagaggccgaagttttgaag
aaccctgagaatgctgaaggttggaggttacttggtgtagcgcatgctgagaatgatgat
gaccaacaggcaattgcatcaatgatgcgtgcacaggaagctgatccaacaaacttggaa
gttcttcttgcattaggagtgagccatacaaatgaattggaacaacaagctgctttgaag
tatctgtatagttggctgcgccaccatccggagtatgggaaaattgcccctcccgaattg
tctgattcactgtactatgctgatgttgctcgaactttcaatgaggcagctcaaatgtca
cctgaggatgcagatgtacacatagtactaggtgtcttgtataacctttcaagagaatat
gacaaagccattgaatccttccagacagctttaaagctcaagccccgagattactcgtta
tggaacaaacttggggcaacgcaagcaaatagtgttcagagtgctgatgcaatatatgca
taccaacgggcattggatctgaagcccaattatgttcgtgcatgggcaaacatgggtatc
agttatgcaaatcagggtatgtacgaggactctattcgttactatgtgcgtgcactagca
atgaatccaaaggcagataatgcatggcagtacttgagaatttccttaagctgtgcttcg
aggaatgatatgatggaagcttgcgactcgcggaatcttgatgttcttcagaaagaattc
ccattataa
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