KEGG   Cynara cardunculus var. scolymus (artichoke): 112514298
Entry
112514298         CDS       T05604                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04142  Lysosome biogenesis
ccav04144  Endocytosis
ccav04145  Phagosome
ccav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112514298
   04145 Phagosome
    112514298
   04142 Lysosome biogenesis
    112514298
   04148 Efferocytosis
    112514298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112514298
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112514298
   04031 GTP-binding proteins [BR:ccav04031]
    112514298
Membrane trafficking [BR:ccav04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    112514298
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112514298
  Exosomal proteins of other body fluids (saliva and urine)
   112514298
  Exosomal proteins of colorectal cancer cells
   112514298
  Exosomal proteins of bladder cancer cells
   112514298
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    112514298
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU ATP_bind_1 RsgA_GTPase cobW AAA_16 Septin nSTAND3 AAA_7 AAA_22 PduV-EutP DAP3 NACHT AAA_24 NB-ARC Lyx_isomer NTPase_1 nSTAND1 Sigma54_activat ATPase_2 AAA_14 MCM AAA_5
Other DBs
NCBI-GeneID: 112514298
NCBI-ProteinID: XP_024976437
LinkDB
Position
LG_6
AA seq 205 aa
MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPSDPSTFPF
ILLGNKIDIDGGNSRVVSEKKAREWCAAKGNIPYFETSAKEDHNVDASFLSIARTAMANE
HEQDIYFQGVPEAVQETEQRGGCAC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtctttgcgtagaagaactttgctcaaagtcatcgttcttggcgacagtggggttggt
aagacgtcattgatgaatcaatatgtacataagaaattcagtcagcaatataaagctaca
attggagcagattttgtcaccaaagaactgcagatagatgacaggcttgtaactttacaa
atatgggacactgctggacaggagaggtttcaaagtcttggtgttgcattttatcgtgga
gcagattgctgtgttctagtgtatgatgtaaatgtgatgcgatctttcgacacgcttgat
acctggcatgaggaatttctcaagcaggcaaatccatcagaccccagtacttttcctttc
atattgcttggcaacaaaattgatatagatggtggaaatagccgagtggtttctgagaag
aaggcaagggaatggtgtgctgcaaaagggaatataccttactttgagacatctgcaaag
gaagaccataatgtggatgcttcattcctctctattgccagaactgcaatggcaaacgag
catgaacaggatatatatttccagggagtccctgaggctgtacaagaaacagagcaacga
ggtggttgtgcatgttaa

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