Cynara cardunculus var. scolymus (artichoke): 112514333
Help
Entry
112514333 CDS
T05604
Name
(RefSeq) long chain base biosynthesis protein 2a
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00600
Sphingolipid metabolism
ccav01100
Metabolic pathways
ccav04382
Cornified envelope formation
Module
ccav_M00094
Ceramide biosynthesis
ccav_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112514333
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112514333
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112514333
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
112514333
Amino acid related enzymes [BR:
ccav01007
]
Aminotransferase (transaminase)
Class II
112514333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
112514333
NCBI-ProteinID:
XP_024976517
LinkDB
All DBs
Position
LG 6:18423814..18433241
Genome browser
AA seq
489 aa
AA seq
DB search
MITIPYLTALTTYFSYGLLFAFGQLRDFFRNLVDWWKASNLQGYAPICLGLEDFYIRRLY
LRIQDCFGRPISSPPDAWFDVVERVSNDNNKTLKRTTKVSRCLNLGSYNYLGFAAADEYC
TPRVIQSLKKYFASTCSTRVEGGTTALHSELEEVVADFVGKPAALVTGMGYVTNSAILPV
LIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLERVLREHIADGQPRTHRPWK
KIIVVVEGIYSMEGEICKLPEIVSICKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAQQIISSIKVILG
EDGSSRGAQKLAQIRANSNYFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLK
RNVAVVTVAFPATPLLLARARICISAAHSREDMVKALEVISRVGDMVGIKYFPAEPKKPQ
LEEGRVKVE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaattccatatttaaccgccttgacaacctatttcagctatggattgctcttc
gcttttggtcaattgcgcgatttcttccgtaatctcgttgattggtggaaagctagcaat
cttcaggggtatgcaccgatctgcttagggcttgaagatttctatattcgcagactctat
cttcggattcaggactgttttggacgacctatatcgagcccccctgatgcttggtttgat
gtggtggagcgtgtttccaatgataataacaagacactcaaacggactacaaaagttagc
aggtgccttaacttgggatcatacaactacctgggatttgctgcagcagatgaatactgc
acgccccgtgtaattcagtctttgaagaagtactttgcaagcacatgcagtactcgtgtt
gaaggaggcacaacagcactgcattctgaattggaggaggttgtggctgattttgttgga
aaaccagctgctttagttactggcatgggttatgtcaccaactctgctatccttcctgtc
ttgattggaaaaggagggttaataattagtgattctttgaaccataattctattgtaaat
ggtgctcgagggtcgggtgctacgattagagtatttcaacataacactccttcccatttg
gagagagtcttgagagaacacatcgctgatggacaacccagaacacatagaccttggaag
aaaatcatcgttgttgtggaggggatatacagcatggaaggggaaatttgcaaacttcct
gagattgtttctatttgtaaaaaatacaaggcatacgtgtatctggatgaggctcacagt
atcggagcagttgggaaaacaggaagaggtgtttgtgagcttttaggcgtggataccgct
gatgtggatataatgatgggaactttcaccaaatcatttggatcatgcggtggttatata
gcaggatcaaaggaacttattcaatatctgaaatatacttgtcctgctcatctatatgct
acgtccatttcacctcctgctgctcagcaaattatatcttccataaaggttattcttgga
gaggatggctctagtcgaggtgctcagaaacttgctcaaattcgtgcgaacagtaactat
tttagatcagagctgcaaaaaatgggttttgaggttttaggggataatgactcgcccgtt
atgcctataatgctttataatcctgcaaaaattcctgccttttcaagggagtgtctcaaa
cggaatgtggcggttgtgactgttgcttttccggccacccctctactgttagctagagca
cgtatatgcatttctgctgctcattcacgggaagacatggtcaaagccttagaggttata
agtagagtcggtgacatggtgggcataaaatactttcctgccgaacccaagaaaccacag
ctcgaagaaggcagggttaaggtggagtag
DBGET
integrated database retrieval system
