Cynara cardunculus var. scolymus (artichoke): 112514338
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Entry
112514338 CDS
T05604
Name
(RefSeq) two-component response regulator-like APRR1 isoform X1
KO
K12127
pseudo-response regulator 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112514338
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Motif
Pfam:
CCT
Response_reg
Jas_motif
Motif
Other DBs
NCBI-GeneID:
112514338
NCBI-ProteinID:
XP_024976521
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Position
LG 6:complement(20379588..20385838)
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AA seq
577 aa
AA seq
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MREMEPKGISLGRRGGGGVNNGKTGDGFIDRSKVRILLCDNDSKGSGEVFTLLCKCSYQV
ISVKSPRQVIDALNADGPNIDLILSEVDLPMAKGLKMLKYIMRKELQRIPVISKLVMSAQ
DEVTFVVKCLRLGAADYLVKPLRTNELLNLWTHVWRRRRMLGLAEKKIMICEFDLVPSDL
SDVNTNSTMFSDDTDEKSRKSAHPEMSVSTHWRDEINVMLAPGSADTQLVRLSNARSNVP
ETNDHLRGEFISAPKKSELKIGQSSAFFTYVKSSMSMRTAPHVSVSVSETAPPSRIHKEP
GAHAGEVDGLATSLTDQNVQQHLCIEKHGVGNSRGHYHSQTLENLPRIDDGPSSNSFPDS
LSLDESSTPPLPTECSPQMNSKMEEFPKEQMQQLRNNSHSHPNISGYNPLPPYPYYLQGA
INQVMMSSSSMVHNHGNTAMLPQYNHGPPHYPPHHMTSFPYYPVNLCLRPGLMGPTVHPW
SSYGSSSSNEGKLKTVDRREAALLKFRQKRKERCFDKKIRYVNRKKLAERRPRIRGQFVR
KVNGINVDLNGHPTSVDFDDENEDEEEDQTCRDYSPE
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagatggagccaaagggaatttcgttgggcagacgtggaggtggaggagttaat
aacgggaagactggggatgggtttatagatcgcagtaaagtgagaattttactctgtgac
aatgattcgaagggttcaggagaggtttttactcttctttgtaaatgctcctatcaagtg
atttcagtgaaatcgcccaggcaagtgattgatgccttaaatgctgacggacccaacata
gatctcattctttctgaagttgaccttcctatggccaaaggcttgaagatgctaaagtac
atcatgagaaaagagttgcaacgcattcctgtcattagtaagcttgtgatgtctgcacag
gatgaagtaacctttgtggtcaagtgcttgagacttggagcagctgattatcttgtgaag
cctttgcggacaaatgagctcttgaatttgtggacacatgtgtggaggagaaggcgaatg
cttggcttggctgagaagaagatcatgatttgtgaatttgatctggtaccgtcagacctt
agtgatgttaacacaaacagtaccatgttttcagatgatacggatgaaaagtcgcggaag
agtgcccatccggagatgtctgtttcaacccattggagagatgagattaatgtgatgtta
gctcctggttctgcagatacacaacttgttagattatcaaatgcccgatctaatgtgccg
gaaaccaatgaccatctacgaggggaatttatatctgctccaaagaagagcgaactgaag
ataggtcagtcttcagcattttttacgtatgtcaaatcaagcatgtccatgagaactgct
ccacatgtttctgtctccgttagtgaaactgctccaccatcaagaattcacaaagaacca
ggtgcccatgctggagaagtggacggtctagctaccagccttactgatcaaaatgttcag
cagcacttatgcattgagaaacatggtgttggtaattctcgaggacattatcactcacaa
actttggaaaatcttccgcgcatagatgacggtcctagcagtaacagcttccctgattct
ctgtcattggacgagtcttctactcccccgttaccaacagaatgctctccacaaatgaac
tcaaagatggaagagttccccaaagaacaaatgcaacaattgaggaataactctcactct
catcctaatatttcaggttataatccacttcctccttacccttattaccttcagggagca
attaatcaggttatgatgtcatcatcctccatggtgcataaccatggtaatacagctatg
ttgcctcaatataatcatggtccaccacattaccctcctcatcacatgacatcattccct
tactaccctgttaatctttgtctacgacctggcctaatgggtcccacagttcacccatgg
tcttcatatggaagttcatcatccaatgaaggaaagttgaaaacggttgaccgcagagag
gcagccttgctcaagttcaggcagaagaggaaagagcgttgctttgacaagaaaattcgg
tacgttaataggaaaaagttagccgagagacggcctcgtatcaggggccaattcgttagg
aaagtaaatgggataaatgtggatctcaacgggcatcccacttctgttgattttgatgac
gagaacgaagatgaggaagaagaccaaacatgcagagattattctcctgaatga
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