Cynara cardunculus var. scolymus (artichoke): 112514417
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Entry
112514417 CDS
T05604
Name
(RefSeq) ubiquitin thioesterase OTU1
KO
K13719
ubiquitin thioesterase OTU1 [EC:3.1.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112514417
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112514417
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C88
112514417
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GFIT
Motif
Pfam:
zf-C2H2_OTU1_C
OTU
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
112514417
NCBI-ProteinID:
XP_024976652
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Position
LG 6:16695119..16701426
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AA seq
208 aa
AA seq
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MEGSIVRRVIPSDNSCLFNAVGYVMDHDKKKASELRQVIAATVASDPTKYSEAFLGKPNE
EYCAWILNPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEKSYRERVMLIYDGLH
YDALAMSPADGAPEEFDQTVFVVNRDRTIGAYESLALNLVKDQQRKRSYTDTANFTLRCG
VCQIGVIGQKEAVEHAQATGHVNFQEYK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtagtatagttagaagggtgattccttctgataatagttgtctcttcaatgct
gtagggtatgttatggaccatgataaaaagaaggcttcggaactgagacaggttatagcc
gctacggtagctagcgatccaacaaaatattctgaagcattccttgggaaaccgaacgaa
gaatattgtgcttggattcttaatcccgagaaatggggaggtgcgatagagctttcaata
ttagcagattattacggtcgtgaaattgcagcatatgatatccaaacaacaagatgtgac
ttgtatggacaggaaaaaagctatcgtgaaagagttatgttgatatatgatggactccat
tacgatgctttggccatgtctccggccgatggagctcctgaagagttcgatcagacggtt
tttgttgttaatcgcgataggaccatcggggcatatgaatcacttgctttaaatcttgta
aaggatcaacaaaggaaaaggagttataccgacactgccaacttcacattgcgctgcggg
gtgtgccaaattggtgtcattggtcaaaaggaagctgtagaacatgcacaagcaacaggg
catgtcaactttcaagaatataaatga
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