Cynara cardunculus var. scolymus (artichoke): 112514579
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Entry
112514579 CDS
T05604
Name
(RefSeq) RINT1-like protein MAG2 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112514579
Membrane trafficking [BR:
ccav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
112514579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
112514579
NCBI-ProteinID:
XP_024976895
LinkDB
All DBs
Position
LG 6:20140660..20150658
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AA seq
789 aa
AA seq
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MVEPLPLVSSLSPSVLSFLDSNLLTANDLQQAPRLVSELQNDCHLLEQSLTDLNQSLGTC
LLAYSTYSDQVGVLFNDINAKLSSFQTSISDGEGGEQRERSEAFLWKELPALAREVARVE
AVRVYAETALKLDTLVGDIEDAVSSSVNRNLRKQPSAENSEEVRFVAISALKLAEDVLCK
VSRTRPQWSRLVSAVDHRVDRALAILRPQAIADYRSLLASLGWPPPLTTLNPSNLEAKKS
AEATNPLFTMRGDLKRQYCDSFLALCKLQELQTQRKSRQLQGQNLEITLHQPLWAIEELV
NPISIASQRHFAKWTEKPELIFALVYKVTQDYVDSMDELLQPLVDEAMLSGYSCREEWIS
SMVTSLSTYMAKEIFPMYIGQLDGENTSENRLQAKISWLHVIDLMISFDKKVRTLVAQSG
IMLLLEEDGNMQNISSLSVFCDRPDWLDIWAEVELSDTIDKLSPEIADEKKWLMEVQESA
LVLGSEDYRSPAISSAFLRRLSSIIERCRSLPGVPLRARFIRLAGAPIIHRFLDSLLLRC
QEAEGLTALTDDDALIKVTKSINASRYFESVLKEWCEEVFFLEMGLDHNKLGIPVGENSS
GGIIDEEICNLEKFRTEWSEKLSTVVLRGFDACSRDYLKNRKQWMEKSEEGWAVSKSFIV
ALDYLQVKMSILEKNLNKMDFVGVWRNLATAIDCLLFSGIFMSNAKFYDGGVERLANDLI
VLFGVFKAWCLRPESFFPKSSEGLKLLKMEDKQLRGSVGGGERWLRQNMIRHLTATEVER
IVKSRVYSN
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacctctccctctagtctcatctctttctccgtcagttctctctttccttgac
agcaatctacttactgccaatgatcttcaacaagctcctcgacttgtttctgagttgcag
aatgattgtcatcttttggagcagagcctcacggatctgaaccaaagcctgggtacctgt
ttgcttgcttactctacatactcggatcaagtaggtgtcctctttaatgatataaatgcc
aaattgagcagttttcaaacttctatatcagatggggagggaggagagcaaagggaaaga
tcagaagctttcttgtggaaggagttgccggcacttgctcgtgaagtggctagggttgag
gcagttcgagtgtatgctgaaacagcactgaaacttgacaccttggttggagacattgaa
gatgccgtctcgtccagtgtaaacagaaatttaaggaagcagccatctgccgagaattca
gaggaagtacgttttgttgctattagtgctcttaaactggcagaagatgttctatgtaaa
gtttctaggacacgccctcaatggtcccgccttgtctcagccgttgatcacagagtggat
cgagcattagccattttgagacctcaggcaattgctgattatcgatctcttcttgcctcc
cttggctggccaccacctctgaccactttaaatccctctaatctagaagcaaagaaatca
gctgaagctacaaatccccttttcacgatgcggggcgatctcaaacgtcagtattgtgac
agttttcttgcactatgcaaattacaggaattgcaaacacaaagaaaatctcgacaactc
caggggcaaaatcttgaaattactttgcatcagccgctttgggctattgaagagcttgta
aatcctatatcaattgcatctcaacgccattttgcaaagtggactgagaaacctgagctt
atttttgctttagtatataaagttactcaggattatgttgattcaatggatgagttattg
cagccactggttgatgaagcgatgctgtcaggttactcttgcagggaagaatggatttca
tccatggtaacatccttgtcgacatatatggcaaaggaaattttccccatgtacattggt
cagctggatggagagaatacttctgaaaatcgattgcaagctaaaatatcctggctacat
gttattgacttaatgatttcttttgataaaaaagtccgaactcttgtagctcagtcggga
atcatgttattgcttgaggaggatgggaacatgcaaaatatttcttctctctctgttttc
tgtgatcgacctgactggcttgacatatgggctgaagtagaactcagtgacacaattgat
aagctgagtcctgaaattgctgatgagaaaaaatggttgatggaagttcaagaatcagct
cttgttttaggttcagaagattacaggtcgcctgcaatttcgagtgcatttctcaggcgc
ctatcatccattattgaacgctgccggtcacttccaggtgttccattgagagcaaggttt
attagattggcaggtgcaccaattatacacaggtttttggattccttacttcttagatgc
caagaagccgaagggctgacagccctgactgatgatgatgctttgattaaagtgacaaag
tctatcaatgcttctcgatactttgagtctgttctaaaggaatggtgtgaagaagtgttt
ttcttggaaatgggattggatcataataaactgggaataccagttggtgagaatagttca
ggtggtataattgatgaggaaatatgtaatctggagaagtttagaactgaatggagtgag
aagttatcaacggttgttttaagagggtttgatgcttgcagtcgtgattatttgaagaac
aggaagcaatggatggaaaagagtgaagaaggttgggcagtttccaaatccttcatcgtg
gcacttgattatttgcaggtgaagatgtcgatattagaaaagaatttgaataagatggat
tttgttggagtctggagaaacctggcaactgctatagattgtcttcttttcagtggtatt
tttatgagtaatgcaaagttttatgatgggggtgtagaaagacttgccaacgatctgata
gttctgtttggggttttcaaagcttggtgtttaagacctgaaagcttctttccaaaatca
agcgaggggttgaaattattgaaaatggaagataaacaactccggggtagtgtaggagga
ggagaaaggtggcttaggcagaacatgataaggcatctgactgcaactgaggtggaaaga
attgtgaagagtagggtgtatagcaactaa
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