Cynara cardunculus var. scolymus (artichoke): 112514645
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Entry
112514645 CDS
T05604
Name
(RefSeq) putative BPI/LBP family protein At1g04970 isoform X1
KO
K05399
lipopolysaccharide-binding protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
112514645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112514645
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
112514645
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
Motif
Other DBs
NCBI-GeneID:
112514645
NCBI-ProteinID:
XP_024976996
LinkDB
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Position
LG 6:16429046..16440129
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AA seq
488 aa
AA seq
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MGRRLLFIFLVPLLLLSSSTRVESGENDFISFGISEKGLEFAKDLLINNAISSLIPLQLP
QIEQKVQIPLVGTVRMVLSDIVIYQVNVSSSIVQPGEIGVTIVASGATANLSLNWSYSYS
TWLFDLSDSGLASIQVEGMEIGLTLGLKNQQGSLSLSPEDCGCYVHYISIKLEGGASWLY
QGIVDYFEDDIVSAVEDTITKNVMDGVMKLDSISESLPKEIAFGDVATLNITITEGPIMT
NTSLLIGIDGLFTQIGYGITSGRYGNSLLSTGSCNNAEKMVGISVHENVLNSASVVYFNT
NKMYWIIENLPEQKLLNTAGWRFIIPKLYKEYPNDEMSLNFTILSPPIIEVENQGIVASV
SSDVIINVVDNGDVIPVACISMEIKASGSAGISLSTLAGGVSLSKLTMSLKWSKIGTLHM
VLVQSVMSAFLRRIILPVVNLRLKIGYSLPDFHGYGLQNASIIYGDSKIIVCSDVDRAYE
YVSHLILK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaagacttctcttcatctttttagtacccctattattgctttcttcatctact
cgtgttgaatcaggtgaaaatgatttcatatcttttggtatttccgaaaagggtctcgaa
tttgctaaggatttactgataaacaatgcgatttcatcgttgattcctcttcaattgccc
caaatcgaacaaaaagttcaaatcccattagttggaacggttcgtatggttctatcggat
attgttatatatcaggttaatgtttcttcttcgattgttcaacctggtgagattggtgtt
acgattgttgcttctggtgcgactgctaatttgagtttgaattggagctattcttatagc
acttggctgtttgatctttctgatagtggattggcctctattcaggttgaaggtatggaa
atcgggttgacgctgggtttaaagaatcaacaaggaagtcttagcctgtctcctgaagat
tgtggatgttatgtccattatatctccataaagttagaaggaggagcatcttggctttat
caaggaatagttgattattttgaagacgacatagtttctgcagtcgaagataccattacc
aagaatgtgatggatggggtgatgaagcttgactcgatttctgaatcacttccaaaagaa
atcgcttttggggatgttgctacgttaaatatcaccattactgagggtcctatcatgacc
aatacttctcttcttattggtattgatgggttatttacacaaattggctacggaataact
tctggtcgttacggtaacagtttgttgtcaactggttcgtgtaataatgcagagaagatg
gtcgggatttcggtgcatgaaaatgttcttaactcggcatcagtagtgtatttcaataca
aataagatgtattggatcatcgaaaacttaccagagcagaagctattgaacaccgccgga
tggagatttataattccaaagttgtataaagaatacccaaatgacgaaatgagcttgaat
tttactattttgtcacctccgatcatagaagttgaaaaccagggtatcgttgcttcggta
tcctcagatgtcatcatcaatgtcgtggataatggcgatgttattccagttgcttgcatc
tcgatggagatcaaagcttcggggtctgcaggtatctcattgagcactcttgctggtggt
gttagcttaagcaaactcacaatgtctctgaaatggagtaaaatcggcaccctgcatatg
gtccttgttcagtctgttatgtcggcgtttctgagaaggatcatcttaccggtcgtgaat
ttacgtctaaagataggatactctttacctgatttccatggctacgggcttcagaatgcc
tcgattatctatggtgattcgaagattattgtttgtagtgatgttgatcgtgcatatgaa
tacgtttctcacttaattttgaagtga
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