Cynara cardunculus var. scolymus (artichoke): 112514833
Help
Entry
112514833 CDS
T05604
Name
(RefSeq) myosin-6-like
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112514833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112514833
04131 Membrane trafficking [BR:
ccav04131
]
112514833
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112514833
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112514833
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112514833
mRNA cycle factors
P-body specific factors
112514833
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112514833
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112514833
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112514833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
AAA_16
AAA_22
DUF1664
CbiA
Flp1_like
Motif
Other DBs
NCBI-GeneID:
112514833
NCBI-ProteinID:
XP_024977225
LinkDB
All DBs
Position
LG 1:31445279..31479843
Genome browser
AA seq
1478 aa
AA seq
DB search
MQASNIIVGSQVWVEDPEVAWIDGDVLEIKGANIKIKCSSGREVVTNASHVYPKDPEAPP
CGVDDMTKLAYLHEPGVLENLRNRYSMDEIYTYTGSILIAVNPFKRIPRLYDKHMMEQYK
GAALGELSPHPYAIADAAYRQMVNEGISQSILVSGESGAGKTESTKSLMQYLAYMGGRRG
VQGQRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNEMGRISGAAIRTYLLE
QSRVCQVSDPERNYHCFYMLCAAPPKVCEKYKLGKPKTFHYLNQTNCYELSGVNESEEYL
ATRKAMDVVGISSDDQESIFRVVAAILHLGNTEFVKDKEPDSSKPKDDQSRFHLKAAAEL
LMCDEAALEDSFCKRVIVTRDESIKKSLDPIAAVVNRDALAKIVYSRLFDWLVSKINNSI
GQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEQID
WSYIEFVDNQDILDLIEKKPGGILALLDEACMFPRSTHETFAEKLFQTFKDHKRFSKPKL
SNSAFTIDHYAGEVTYQTEFFLDKNKDYVIAEQQALLSASKCSFVSGLFPPAAEESSKTS
KFSSIGTRFKQQLQALLETLSHTEPHYMRCVKPNNLLKPGIFENQNILQQLRCGGVMEAI
RISCAGFPTRKPFKEFIGRFKIFAPDDVKKSTDDVKTSKLLLEKAKIKGYQIGKTKIFLR
AGQMAELDARRSEVLGRSASIVQRKFLSHSECKKFNMLRSSSIQLQAVCRGHIGRHRFEC
RKRDVASLRLQKDGRMFLKRKSYKLLYSSAIKIQSGMRGLAARNTFRFKKQEAAAVIMQR
QCRQYLARLRYCRLRKAAIATQSFWRARLARRELRKLRQAARDTGALQEAKSKLEKEVEE
LTWRLQLEKRIRADVEEAKNQESAKLQSVLQEMQAQSQHAKELLLKEQEAAKKEIEQLRA
GEEASNKEIVEKFTAENEKLKNMVSSLEQKIDETEKKYEESNKVSEERLKQATEAESKIV
EMRNTMQSLQEKITDLEGENQLLRQQIMLSSASKRMSGRFSFSSKGPENGHHDPQTPMKR
FDSSLRQSAIEKHRENVDTLIKAATEDLGFSNGKPVVTYIIYKSLVHWKVFEAERTSVFD
RLIQVFGSAIQKEEDNQHMSYWLSATSTLLFLLQKSIGSGGGAQKPPQPTSIFGRMAQSF
RKSPSYSNLEIVRQVDAKYPALLFKQQLTAYVEKIFGIVRDNLKKELSTCISSCIQVPLC
SRTSKATTPPSIYWQNAVGCLNGMLHTLEEYHVPIVLAQKIFAQAFSSINVQLFNSLLLR
RECCTFSHGEYVKAGLAELEIWCHNATEEYADSAWDELKHVRQAVGFLVIHQKSRISYDD
LTKDLCSVLSVQQLYRICTLYFDDNYNTPSVAPEVITKLKASTEGLEDSENNSFLLEDDP
CVPFSVDELCSSLNEKEFAEIKPTCSLVENPEFRFLVE
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatccaatataatagttggatctcaagtttgggtggaggatcctgaggtagct
tggattgatggtgatgttttggaaataaaaggtgcaaacattaaaataaagtgttcatca
ggaagagaagttgtcactaatgcatcccatgtgtatcctaaagatcctgaggctcctcca
tgcggagtggatgatatgacaaagcttgcttatctccatgagccaggggttctagagaat
ctaagaaatcgatacagtatggatgagatttatacttacacaggaagtattttgatagct
gtaaaccctttcaaacgaatacctcgtttatatgacaaacacatgatggaacaatacaaa
ggggcagctcttggggaactgagtccacatccttatgcaattgctgatgctgcatacagg
cagatggttaatgagggaatcagccagtcaattctcgtcagtggagagagcggagcaggt
aaaacagaaagcacaaaaagtcttatgcagtatcttgcctatatgggaggtcggcgtgga
gttcagggacaaaggagtgtggaacagcaagtcctagaatcaaatccagttctagaagca
tttgggaatgccaaaaccgtcagaaacaataattcaagtcgttttggtaagtttgttgag
atccaatttaatgaaatggggaggatctctggagccgctataagaacatatttgctggag
cagtcacgtgtttgtcaagtttcggatcctgagagaaattatcattgtttttacatgctc
tgtgctgcacctcccaaggtgtgtgaaaagtataagttgggaaagcctaagacatttcat
taccttaatcaaacaaactgttatgaactgagtggagtgaatgagtcagaagagtacctt
gcaacaagaaaggctatggatgttgttgggatctcttctgatgaccaggagtctatattc
cgtgttgtggctgcaattcttcacctaggaaacactgagttcgttaaggacaaagaacca
gattcatctaaacctaaggatgatcaatctaggtttcatctaaaagctgcagctgaactt
ttaatgtgtgatgaggcggctcttgaagattccttctgtaagcgtgtaattgtaactcgt
gatgagagcatcaaaaagtcgcttgatccaattgctgcagttgtcaatagagatgctttg
gcgaaaatagtttattcaagattatttgactggcttgtaagcaagatcaataattctatt
ggtcaagatccagagtcaaaatccttgatcggagttctggacatctatggatttgaaagt
ttcaagacaaacagttttgagcaattctgtatcaatctgactaacgagaaacttcagcaa
cattttaatcagcacgttttcaagatggagcaagaagaatatactaaagagcaaatcgat
tggagttacatagagtttgtggacaatcaagatattctagatcttattgagaagaaacct
ggaggaatccttgctcttttggatgaggcttgcatgtttccaagatctacacatgaaacc
tttgctgaaaagcttttccagacgttcaaagatcataaacgctttagcaagccaaagctt
tccaattcagcatttaccattgatcattatgctggtgaggtcacgtatcaaaccgagttt
ttcttggataagaacaaggactatgttattgcagaacagcaagcactcttgagtgcttca
aaatgctcctttgtctcaggcttatttccacctgcagcagaagagtcatctaaaacgtca
aagttctcatcgataggtactcggttcaagcaacaattacaagcattgcttgagactctc
agtcacacagagccacattacatgcgttgtgtcaaaccgaacaatcttttaaagcctggt
atctttgagaatcagaatatactgcaacaactgcggtgtggtggagtgatggaggcaatt
aggatcagttgtgccggttttcctacacgtaaaccttttaaagagtttattggccgcttc
aaaatctttgcacctgacgatgtaaaaaaaagcactgatgatgtcaagacttccaagctg
cttctggagaaggcaaagattaaaggttatcagattggtaaaacaaaaatatttctcaga
gctggtcagatggcagaactagatgctcggagaagtgaggttttaggaagatctgctagc
attgtccagagaaaatttctctcccattcagaatgcaagaagtttaacatgttgcgatct
tcgtcaatacagctacaagctgtgtgtagaggacatattggacgtcatcgatttgagtgc
cgaaagagagatgttgcttctctgagactccagaaagatggacgcatgtttctcaagagg
aaatcttacaaacttttatactcttcggctattaaaattcaaagtggaatgcgtggatta
gctgcgcgtaatacatttcgcttcaaaaagcaagaggcagcagcagtgattatgcagaga
caatgccgacaatatctggcccgcctccgttattgtaggttgaggaaagcagcaatagct
actcagtctttctggagagcaagactggcacgcagagaactaaggaagcttagacaggca
gcaagggacactggtgctctacaagaagccaaatctaaactggaaaaggaagttgaagaa
ctgacctggcgattgcagctggagaagcgcattagagctgatgtggaggaggctaaaaat
caggaaagtgcgaaattgcagtctgttctgcaagagatgcaagctcaatcccaacatgct
aaagaactgcttttgaaggaacaagaggctgcaaagaaagaaattgagcaacttcgtgca
ggtgaagaggcttcaaacaaggagatagtcgaaaagtttactgctgaaaatgagaaactc
aagaacatggttagttcactggaacagaaaattgatgaaacagaaaaaaaatatgaagag
agcaacaaggtgagtgaagagaggttgaagcaggccacagaagcagaatcaaagatagtt
gaaatgagaaacacaatgcaaagtcttcaagaaaagatcactgacctggagggtgagaac
cagcttctgcgacagcaaatcatgctatcatcagcttccaaaaggatgtcaggacgtttc
tcattctcatctaagggtccagagaatggccaccatgacccacagacacctatgaagaga
tttgatagctcattgaggcaatcggctattgagaagcaccgtgagaacgttgatactctt
atcaaagcagctacagaagatcttgggttcagtaatggaaaaccagttgttacatatatc
atatacaaaagtcttgtgcactggaaagtttttgaagcagaaagaaccagtgtatttgat
cgtcttatccaggtgtttggttctgcaatacagaaagaggaagacaaccagcatatgtct
tattggctctctgccacatcgacattgctgtttttgcttcaaaagagtataggttccggt
ggaggtgctcaaaaacccccccaaccaacatcaatatttggaaggatggcacaaagcttt
cgcaaatctccatcgtatagcaatcttgaaatagtgcgccaagtcgatgccaagtaccca
gctttgcttttcaagcagcaactaactgcttatgttgaaaaaatatttggaatcgttcgt
gacaatttgaagaaggaactgtcaacatgtatctcttcttgtatccaggtacctttgtgc
tcaagaacgtcaaaagctaccactcctccatctatctactggcaaaacgccgttggatgc
ctaaatggcatgctccatactttggaagaataccatgtgccaatagttcttgctcagaag
atcttcgctcaagctttctcttccatcaatgtacagctattcaacagccttcttctacgt
cgagaatgctgcacatttagccacggggaatatgtgaaagcagggttagctgagttagag
atttggtgtcataatgccacagaagagtatgcagactcagcatgggatgaacttaagcat
gtaaggcaggcagttggattcctggtcatacaccagaagtctagaatttcttatgatgac
ctcacaaaggatctatgctctgttctaagtgttcaacaactttacagaatttgcacactc
tactttgatgacaattacaatactccaagtgtggccccagaagttattactaaattgaaa
gctagtacagaaggcttggaggattctgaaaataactcttttttgctagaagatgatccc
tgcgttcccttttcagttgatgaactttgcagctccctgaatgagaaggagtttgcagaa
ataaaacctacttgttcccttgtggaaaatccagagttccgatttctagtggagtaa
DBGET
integrated database retrieval system
