Cynara cardunculus var. scolymus (artichoke): 112514853
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Entry
112514853 CDS
T05604
Name
(RefSeq) syntaxin-52-like
KO
K08503
syntaxin of plants SYP5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112514853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112514853
Membrane trafficking [BR:
ccav04131
]
SNARE
SNAP-25[C] (Qc)
STX8
112514853
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Gene cluster
GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
NPV_P10
XhlA
Securin
CCDC93_CC
CLZ
NET2A_C
Motif
Other DBs
NCBI-GeneID:
112514853
NCBI-ProteinID:
XP_024977247
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All DBs
Position
LG 6:complement(16397475..16403619)
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AA seq
229 aa
AA seq
DB search
MADPWVREYNEATKLSDDISSMISAMSSYSSGPEAQRHASATRRKITILGTRLDSLQSLL
TKLPARQPLTEKEMNRRKDMLANLRTKVTQMGSALNMSNFANRDSLLGPDTKAADAMSRT
TGLDNSGIVGLQRQIMREQDEGLEKLEETVISTKHIALAVNEELDLHTRLIDDLDHHVDV
TDSRLKRVQKHLAILNKRTKGGCSCLGLLLSVVGIVMLLVAIWMIIKYL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccatgggtgagggaatataatgaagcgactaaactttccgatgatatcagc
agcatgatatctgcaatgagttcatatagctcagggcctgaagcacagcgtcatgcttct
gctacaaggaggaaaattacaatattaggaaccagacttgacagcttacagtctcttctg
acaaagcttcctgctagacagccattaacggagaaagagatgaatcgacgtaaagatatg
cttgcaaatttgagaacaaaggtcacacagatgggctctgcgttgaacatgtcaaacttc
gctaatagggacagtctacttgggccagatactaaagcagctgatgcgatgagcaggaca
actggtttagacaactctggcattgttgggcttcaaagacagattatgcgagagcaagat
gaaggcctagaaaaactggaggagacggtgataagtacaaagcatattgcgttggcagta
aacgaggaacttgatttgcacactaggctcatcgatgaccttgaccatcatgtggacgtc
acagattcccgacttaagagagtgcagaagcacctggctattctgaataaacgcaccaag
ggtggttgctcctgcttaggcttgttgttatccgttgtcgggattgttatgctacttgtg
gcgatatggatgattataaagtacttgtga
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