Cynara cardunculus var. scolymus (artichoke): 112514928
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Entry
112514928 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112514928 isoform X1
KO
K22184
bromodomain-containing protein 9
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112514928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112514928
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
112514928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Motif
Other DBs
NCBI-GeneID:
112514928
NCBI-ProteinID:
XP_024977335
LinkDB
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Position
LG 6:16626218..16632544
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AA seq
948 aa
AA seq
DB search
MGQIVRRKRRGRPSKIDRARRNSFVAPPSPVDRRRSRRRRNVKYSFDIDDYVDDDEFYDD
EDEEVGRREKKLRLLPCEDDSRSQRRVGHAPSYTSSDDYDEDDDSKALKKRKIGGVDEED
YEDNEIEEIRGRKSESEDEEEEAGGTNFVCGTALDLRKEVMLPDKKTLQFILDKLQKKDI
YGVYAEPVDPEELPDYHDVIKHPMDFATIRKKLAKGAYLTLNEFEHDVLLICRNAMQYNA
PDTIYYKQASSIQEQAKLRFERLRANGDRSELELKPEQKTTPSFSLPKKQLKKSVAQTLQ
DPVGSETFPNGSSGQTPSFRQNSGEVLIAENSSLAENNLDKEQELLPGKGFVSKLGRKPS
IHDENRRATYNISVQPVTESSSIFSTFEDESKHFIPVCRNNAKCPRVLIVGLHSDHSYAR
SLARFAATLGSVAWKVASQTIEQALPEGVKFGRGWVGEYEPLPTPVLMPENRSMKEPDFL
SNFKIDGKSSKNAASGNDKARKSPPVDNGLNEGGCGSRKLPVFGNTTVSNGARIHLNQES
PRAAGNDLRPPFFSSLQVNPTFSGTNLPHQNDTPSRKFARPSPQVEPKPNHPLPTHASSA
DFFAKRLISNVSDIPSPRPAKPISQNGNLMSLASFKHPIPNGTNDGFSPKGKPTPVFQDS
NRMVPIDSNLPYQQERKPTSVSRDYNRMVPMDNHLPHQQEQKPTSGSRDYNRIVPMDNTL
PHQPCLNDPVQMMKMLAEKAQPQQNNSNGFGSGSGSPVGPKREDSNKVQHQQIYSNGSQI
GSKRDDLSNVALTAAQAWMSLGGTAGGFSKPPLTENPNPHKIPADSLYNDRLQPQVSRFR
GEFPVPGIQNYQQPVHAFVPQPVRTTNEARFQNRHSGFPQLLTTDLSRFQGQSGWRGVAP
QLPNPSKPKHQESGPPDLNVGYQSMGSPVRQSTAMLVDSQQPDLALQL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagatcgtgaggaggaagaggagaggaaggccatccaagatagatcgagcacgc
cgtaactctttcgtagcgccgccgtcaccggtggaccgacggaggagccgtagacgccgg
aacgtcaagtacagctttgatatcgatgattacgtcgacgatgacgagttttatgatgat
gaagatgaggaagtcgggaggagagagaagaagctcagattacttccatgtgaagatgat
tccaggtcgcaacggcgcgtgggacacgcgccgtcgtatacgtcatctgacgactacgat
gaagatgacgatagtaaggccttgaagaaacggaagattggtggagttgatgaagaggat
tacgaagataatgaaattgaagagataagaggacgaaaatcggaatccgaagatgaagaa
gaagaagcaggagggacgaactttgtttgtgggacggcgttggatcttcggaaggaggta
atgttgcctgataaaaagactctacagtttatcctcgacaaacttcaaaaaaaagatatt
tatggggtttacgctgaaccagttgatcctgaggagttgcctgattatcatgacgtgatc
aagcatccaatggacttcgccactatcaggaaaaaacttgctaaaggagcctatttaaca
ttgaatgaatttgagcatgacgtgcttctgatttgcagaaatgcaatgcaatacaatgca
cccgatacaatttactataaacaggcaagctctattcaagagcaggcgaaactgagattc
gagaggctaagggctaatggtgatcgatctgagttagaactcaagccagagcagaaaacg
acaccaagtttctcgttacctaaaaaacaattaaagaagtcagtggcccagactctgcag
gaccctgttggctcggaaaccttcccaaatggttcatctggccagactccttcgttcaga
cagaatagtggtgaagtgctgattgctgaaaattcttcgttagcggaaaacaatctagat
aaagagcaagaactactaccagggaagggcttcgtatctaaacttggaaggaagccatcc
atacatgatgaaaatcgacgtgcaacatacaacatatccgttcaaccagtaaccgaatca
agctctatattttctaccttcgaggatgaaagcaaacacttcattcctgtatgtcgtaat
aatgctaaatgtcctcgtgttttaatagttggattgcactcagatcattcatacgctagg
agcttggctcgttttgctgcaactcttggatctgttgcttggaaagttgcatctcagacg
attgaacaagctttgcccgaaggtgtcaaatttggccgtggatgggtaggagaatatgag
ccacttccgacccctgtactaatgccggaaaaccgctccatgaaagaaccggattttctt
tcgaacttcaagattgatggaaaatcttctaaaaatgcagcttcgggcaatgataaagct
cgtaaaagccctccggttgataacgggctgaatgaaggtggttgtggttcaaggaaattg
ccagtattcgggaacaccaccgtcagtaatggtgcccggatccatttaaatcaagaatct
ccgagggcggccggtaatgatctaagacctcctttcttttcttcgttgcaagtgaatccc
acgttttccggtacgaatcttccgcatcagaacgacacaccatctaggaagtttgccaga
ccctcacctcaagttgaaccgaaaccgaatcacccgctcccaacccatgcaagttccgca
gatttctttgcaaaaagactgatctctaacgtttctgatatcccgtctcctagacccgca
aaacccatttcacaaaacggaaatcttatgtcgttggcatcttttaagcatccgattccg
aacggtacaaatgacggattttcccctaaaggaaaacccacaccagtttttcaagattct
aatagaatggttcctatagacagcaatttaccgtatcaacaggaacgaaaacccacatca
gttagtcgggattataaccgaatggttcctatggacaaccatttgccgcatcaacaggaa
caaaaaccgacatcaggtagtcgggattataacagaatcgttcctatggacaatactctt
ccccatcaaccgtgccttaatgatcccgttcagatgatgaaaatgttagccgagaaggct
caacctcaacaaaataactcgaacggttttggttcgggttcgggttccccggttggccca
aaaagagaggattcaaacaaagtgcagcatcaacaaatctattcaaatggttcgcaaatc
ggctcaaaacgagacgatttaagcaacgttgcattaaccgctgctcaggcatggatgtca
ttaggcgggaccgccggagggttcagtaaaccaccattaaccgaaaacccgaacccccac
aagatacctgccgattctttatacaacgatcgcctgcagcctcaagtttcacgttttcgt
ggcgagtttcccgttcctgggattcagaactaccaacaaccggtccacgctttcgtccca
caacccgttagaacaaccaacgaggcccgtttccaaaaccgacattctggcttccctcaa
ctactaaccacggatctatcgagattccagggacagtctggttggagaggggtcgcacct
caattaccgaacccgtcaaaaccgaagcatcaagaatcaggccccccggatttaaacgta
ggctaccagtcaatggggtcgcccgttcgacagtctacggctatgttggttgattctcag
caaccagacttggctttacaactctaa
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