Cynara cardunculus var. scolymus (artichoke): 112514936
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Entry
112514936 CDS
T05604
Name
(RefSeq) BRCA1-associated protein-like
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112514936
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112514936
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112514936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
RRM_1
Motif
Other DBs
NCBI-GeneID:
112514936
NCBI-ProteinID:
XP_024977348
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All DBs
Position
LG 6:17633125..17640452
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AA seq
468 aa
AA seq
DB search
MSEATSASAAAISAATVADDYFRPSSISKLPITDVGDSSTSSSSNAYVTQTFPFSSGNPR
IEQTRGVMHLFLDDAVSSSSNLPVGRMPLICVLGVPNHMTYADFCQFCGSFIHHILEMRI
VRNDGMENRYSILVRFDDQTSTDAFHKHFNGRRFSSLETESCRVLFTFDVQYTSLIEHAQ
TSPASTEQPSCPVCLERLDQDMSGILITMCNHSFHCSCISKWTDSSCPVCRYCQQQPEKS
KCLICQTSENVWLCLLCGFVGCGRYKDGHAIQHWKETQHCYSLELETQRAWDYVGDNYVH
RLLQSKTDGKLVELNTTDNIDFGTDPGFSEALLNSRVESIAKEYNELLTTQRENQKMYFE
SLLQELEEQIERDISAAVKTSLEQNTKLQKMQAKLDKGLKEKKFLDDINENLLRNKEIWE
GIIVKIQEREKEASRLKDQKIQDLEAQLQDLMASLEEINTVEPSPTSH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagcgacttcagcaagcgctgccgcgatttctgcagcaaccgtcgccgatgat
tatttccggccgtcgtccatcagtaaacttccgatcaccgatgttggcgactcctccact
tcctcctcgtcaaatgcttacgtaactcagacatttcctttctcatctggaaaccctaga
atcgaacagactagaggcgttatgcatctatttctcgacgatgccgtttcttcttcatcc
aatttacctgttggaagaatgcctcttatttgtgtacttggggtgccaaatcacatgaca
tacgctgacttttgccagttttgtggttcttttattcatcatattttggagatgcgcatt
gtcaggaatgatggaatggagaaccggtatagtattttggtacgatttgatgaccaaacc
tcaacagatgcatttcataagcattttaatggaaggcgtttctcatctcttgagacagag
tcatgtcgtgtgcttttcacctttgatgtgcaatatacaagcttaattgaacatgcgcaa
acttcccctgcaagtacagagcagccttcatgtccagtctgtcttgagagattggaccaa
gatatgagtgggattctgataaccatgtgcaaccattcattccattgttcgtgtatttca
aaatggacagattcttcatgccctgtatgtcgttattgtcagcagcagcctgaaaagtct
aaatgcctgatctgtcaaacctcagaaaatgtctggttatgtcttctttgtggctttgtt
ggctgtggaagatataaagatgggcatgccattcaacactggaaagaaacacaacactgc
tactcccttgaactggaaacacaacgtgcctgggattacgttggtgacaattacgttcac
cgtttacttcaatccaagacagatggaaagctggttgagttgaatacgactgataatatt
gattttggcactgatcctggattcagtgaagctcttctgaatagccgagttgaatctatc
gccaaagagtataatgagctactcactacccaacgcgagaatcaaaaaatgtattttgaa
tctttactccaagagcttgaagaacaaattgagcgggatatttcagctgctgtaaaaact
tctttggagcaaaatacgaaattgcaaaagatgcaagccaagctagataaaggactcaaa
gagaagaaatttctagatgatatcaacgagaatcttttgagaaacaaggagatatgggaa
ggcatcatagtgaaaatccaagaaagggagaaggaagcttcaaggctcaaagatcagaag
atacaagatttggaggcccagcttcaggacttgatggcatctcttgaagaaattaatacg
gtagaaccgtctccaacatcgcactag
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