Cynara cardunculus var. scolymus (artichoke): 112514980
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Entry
112514980 CDS
T05604
Name
(RefSeq) WD repeat-containing protein DDB_G0290555
KO
K14841
ribosome biogenesis protein NSA1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112514980
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112514980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40
ANAPC4_WD40
EIF3I
PQQ_2
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
112514980
NCBI-ProteinID:
XP_024977402
LinkDB
All DBs
Position
LG 6:18839276..18846101
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AA seq
463 aa
AA seq
DB search
MPRTTTVESAGCPPLRALTFDVLGLIKVTEARSQQGGVAKVVERWGEPDSSRCVLAASMN
DRKIDPLLAVARKNGAIELLSPVNGDVRASFTIKNQADVQSQEDDIVGLHLFKKRTSESS
SRSCTLLTCTMKGLTSLRSTIIPKSPGDSTCDDPPTTWNVCAAGNVLCCKVDESENYALY
GGKGVEVNIWDLATHTKIWTAKSPPKNSLGIFTPTWFTSATFLSKDDHRKFVAGTNSHQV
RLYDMSAQRRPVMSFDFRETPIKAVTEDLDGNTIYIGNGSGDLASVDIRTGKLLGCFLGK
CSGSIRSIARHPDLPVIASCGLDSYLRIWDIQSRQLLSAVFLKQHLTNVVFDSHFNDEEV
ASVAPLPPSEVKDDEELKDGDEEESPPVVKRKKKKSKSYAVDGTEDEPREKKKKSKSYAV
DGTEDEPRXKKKKSKSYAVDGTEDEPRKKKKRSKSKAVEVGVM
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaacaaccaccgtagaatccgctggctgtcctccgcttcgcgccctaactttc
gatgttctcggtctcattaaagttacagaagctcggagtcagcaaggaggagttgctaag
gtggtagagagatggggggagcctgactcctctcgatgcgtgcttgccgcttctatgaat
gaccgtaaaattgatcctctgttagctgttgcaaggaaaaatggcgcgattgagttactt
agccctgttaatggagatgttcgagcttcttttaccattaagaaccaagctgatgttcag
tctcaagaagatgacattgttgggttgcatttattcaaaaaacggacctcagagtcatca
tccaggtcgtgcaccttgcttacatgcacaatgaaagggcttacaagcctgagatctacg
ataattccgaaatccccaggggactcgacttgtgatgatcctccaacaacatggaatgtg
tgtgcagctggtaatgtcttgtgttgtaaagtggatgaaagtgaaaactatgccttatat
ggagggaagggagtagaggttaatatctgggatcttgcgacgcatacgaaaatctggacg
gcaaaatcacctcctaaaaacagccttggtatatttacacctacttggtttacttctgcc
acatttttaagcaaagatgatcaccgcaagtttgtggcaggcaccaacagccatcaggta
cgtctctatgatatgtctgctcagagaagacctgtcatgtcatttgattttcgcgagacc
cctattaaggccgtcactgaagatctagatggtaatacgatatacattgggaatgggtct
ggtgatcttgcatctgttgacatacgcacagggaaactactgggatgctttttggggaaa
tgctccggaagcatcagatcaatagctaggcacccagatctcccagtgattgcctcttgt
ggactcgacagctatttacgcatctgggatatacaatcaaggcagctactctctgcggtc
ttcttaaagcagcatctcacaaatgtcgtcttcgattctcattttaacgatgaagaagtt
gcttctgtggcccctctgcctccaagtgaggtaaaagatgacgaagagctaaaagacgga
gacgaagaggagtcgccacccgttgttaaacggaagaagaaaaaatccaaatcatatgcc
gtagatggaaccgaggatgagccacgggaaaagaaaaagaaatccaaatcatatgccgta
gatggaaccgaggacgagccacggnaaaagaaaaagaaatccaaatcatatgccgtagat
ggaaccgaggacgagccacggaaaaagaaaaagagatccaagtcaaaagccgtagaggtt
ggcgttatgtaa
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