Cynara cardunculus var. scolymus (artichoke): 112515115
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Entry
112515115 CDS
T05604
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112515115
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112515115
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112515115
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
112515115
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class II (U)
112515115
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112515115
Prokaryotic type
112515115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
PheRS_DBD1
tRNA-synt_2
tRNA_synthFbeta
PheRS_DBD2
Motif
Other DBs
NCBI-GeneID:
112515115
NCBI-ProteinID:
XP_024977552
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All DBs
Position
LG 1:20422059..20433847
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AA seq
488 aa
AA seq
DB search
MAEEAVLGFLEKNELITDSGEFAVEQGISHDEIVNVIKSLNGFRFVDAQDIKKERWQLTA
EGKTYAANGSPEFQLFMAIPQEGISRVELQKKLGDSVFKIGCQQAIKNKWVEMGKSQVSR
KVAHVDDNVKAMLVRINDGEAVSQEEIDALKRRKLISPQIWKGYSVRKGPNYAPKRRKPA
TDLTRENLQRGDWKDLQFKEYNFSAKGLPAEGGYLHPLLKVRRQMQMIFLQMGFEEMPTN
NYVESSFWNFDALFQPQQHPARDSHDTFFLREPSTTKMLPEDYVERVKQIHESGGHGSRG
YQYDWKRDEANKNLLRTHTTAVSSRMLYALAQKPFEAKKYYSVDRVFRNEAVDRTHLAEF
HQIEGLICDRGLNLGDLQGVLYDFFSRLGMSKLRFKPAYNPYTEPSMEIFGYHEGFKKWV
EVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDLSLIKSN
PICRIGLQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagcagtattggggtttctggaaaagaacgaactgataacagattcaggt
gagttcgctgtggaacaagggatcagtcatgacgagattgtgaacgtcattaagagtctc
aatggctttcgattcgtcgatgctcaggatattaagaaggagagatggcaactaactgct
gaaggcaaaacttatgctgctaatggatctccggaattccaactattcatggccatccca
caggagggtatctcacgagttgaactgcagaagaagttgggagactcagttttcaaaata
ggttgccagcaagccataaaaaataaatgggtggagatggggaagtcacaagtctctaga
aaggttgcacatgtcgatgataatgtgaaggctatgctcgtaaggataaatgatggagag
gccgttagccaagaggaaattgatgctctgaagagaagaaaacttatttctccacagata
tggaaaggctactcagttagaaaaggtcctaattatgccccaaaaagaaggaagcctgcc
actgatttaacccgagaaaatctgcaaaggggtgactggaaggatttgcagtttaaagaa
tataatttcagtgcaaaaggtttgcctgctgaaggcggttatctccatccactgctcaag
gtacggcgacaaatgcagatgattttccttcagatgggattcgaggagatgcccacaaac
aattatgtggaaagcagcttctggaactttgatgcacttttccaaccgcaacaacaccct
gcccgtgattcacatgatacattctttttacgagaaccttctaccacaaagatgcttccg
gaagattatgttgagagggtgaagcagattcatgagtctggaggtcatggatcaagaggg
tatcaatatgactggaaacgagacgaagcaaataaaaacttactacgaactcatacaact
gctgtctcctcgaggatgctgtatgcacttgcacagaaaccttttgaagccaaaaagtac
tattctgttgatcgggttttcagaaatgaagctgttgatcggacacatcttgcagaattt
catcaaatagaagggcttatatgtgatcgcggactaaatcttggggacctgcagggtgtg
ctgtatgacttcttctcacgtttgggaatgtccaagttgcgtttcaagcctgcctacaac
ccttacactgaacccagcatggaaatatttggttatcatgaaggctttaagaagtgggtt
gaagtgggaaattctgggatgttcagacccgaaatgttacttcctatgggactccccgag
gatgttagagttattgcgtggggactttccctggaacggccaactatgatactttatggc
attgataacatcagagatcttttcgggcacaaggtggacctcagtctcattaagagcaac
cccatatgccgcattggtctgcaataa
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