Cynara cardunculus var. scolymus (artichoke): 112515137
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Entry
112515137 CDS
T05604
Name
(RefSeq) alpha-mannosidase At3g26720-like isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
112515137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112515137
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
112515137
Membrane trafficking [BR:
ccav04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
112515137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
112515137
NCBI-ProteinID:
XP_024977579
LinkDB
All DBs
Position
LG 7:58673..82548
Genome browser
AA seq
1041 aa
AA seq
DB search
MKRLFSVSAFLVFLCFWGGECKYMVYDTSQRILADKINVHLVPHSHDDVGWLKTVDQYYT
GANNSIRGACVQNVLDSVISALLDDKNRKFIYVEIAFFQRWWNQQSGLLKTKVKELVNSG
QLEFINGGMCMHDEATPHYIDLIDQTTLGHMFIHREFGQKPRVGWQIDPFGHSSVQAYLL
GAEVGFDSLFFARMDYQDRAKRKCDKTLEVVWQGSRSLGSSSQLFTGIFPRHYDPPDGFT
FEINDVSPPIQVNASKTSCVISYFWCFCLVTNSTLKDDVLLFDYNVQERVNDFVAAAMAQ
ANVTRTNHIMWAMGTDFRYQYALSWFRQMDKFIHYVNLDGRVNALYSTPSIYTDAKYAAN
ETWPLKTGDFFPYADKENTYWTGYFTSRPAFKGYVRTMSGYYVAARQLEFYKGRSSSGPN
TDALANALAIAQHHDAVSGTQRQHVAADYAMRISIGYAEAEEVVASTLAYLTTSRSSANY
EKSVGMFQQCPLLNISYCPPSEVVLANGKSLVVVVYNSLGWKREEVVRVPVSSHELIVLD
SSGREIESQLLPIFNSSLNMRDYHVKAYLGKSPSTTPQYWLGFTATTPPLGFSTYIISSA
KHTDRSSIMSTMWTSDSTSDKTVVVGGGDLKLLYATDEGKLTSYINNRNMVEESMEHSYS
YYSGYNGTDQASGAYIFRPNGTFLIKSEGEKAFTILRGPLMDEVHQQLNSWIYQVTRVYK
EKEHAEVEFIIGPIPVDDGVGKEITTQITTAFKTNKTFYTDSNGRDFIKRVRDFRTDWDL
QVNQPVAGNYYPINLGAYVGDGRMELSVLVDRAVGGSSLVDGQIELMLHRRLLCDDLKGV
GEVLNETICVLNDCKGLVVQGKFYFRIDPVGTGAKWRRTFGQEIYSPLLLAFSEQDENEW
KNSHVSSFSMIDASYSLPNNIAVITLQELESGKVLVRLAHLYEVGEDKDYSVMATVELKK
LFPNRKISKVTEMNLSGNQERGEMERKRLAWKVKDLSEVKIVRGGAVDSEKQVVELGPME
IRTFIIDLDYLGMFGSVPSDE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattgttcagtgtttcggcgtttcttgtgtttctttgcttttggggcggggag
tgcaagtatatggtgtatgatacttctcaaagaatcctagccgacaagatcaatgttcat
ttggtacctcactctcatgatgacgtcggctggctgaagaccgtcgatcagtactacacc
ggtgctaacaattccattcgaggtgcctgtgttcaaaacgtgttggattccgtgatttcg
gctttgctcgatgacaagaatcgcaagttcatctacgttgaaatcgcattcttccagcga
tggtggaaccagcagagcggactacttaagactaaagtcaaggagctcgtcaattctggt
caacttgagttcataaatgggggtatgtgcatgcacgatgaggcaacaccacattacata
gacttgatcgatcaaacaactttgggacacatgtttatacacagggagtttggtcaaaaa
cctagagttggttggcagatagatccttttggccactcctctgttcaagcttacttgctg
ggtgctgaggtgggatttgactctctcttctttgctcgaatggattatcaagacagggct
aagcgcaaatgtgataagactcttgaggttgtctggcagggttctaggtctcttggttca
tcttcgcagttatttactggtatatttccccgacattatgatccccctgatggtttcaca
tttgaaataaatgatgtatctcctcctattcaggtaaatgcatcaaaaacaagttgtgtg
atatcatatttttggtgcttttgcttagttactaattctactttaaaggatgatgttctc
ctctttgactacaatgttcaagagcgggtaaatgattttgtagctgctgccatggcccag
gctaatgtaacaaggacaaaccatataatgtgggcaatgggaaccgatttccggtatcaa
tatgcactttcatggttcaggcagatggacaaatttattcattatgttaacctggatggt
cgtgtgaatgcactatattctactccatccatttacacagatgcaaaatatgcagctaat
gaaacatggcctctgaaaactggtgacttcttcccatatgcagataaagaaaatacctat
tggacaggatactttactagcaggccagcttttaaaggttatgtcaggacaatgagcggt
tactatgtggctgcaaggcagttagaattttacaagggcaggagcagttccggaccaaat
acagatgccctggccaatgctctggcaattgctcagcatcatgatgcagttagtggtaca
caacggcagcatgtggctgctgattatgcaatgcgtatctcaataggctatgcagaggct
gaggaagtagttgcttcgacattagcatatctaacaacgtcaagatcaagtgccaactat
gaaaaatcagttggcatgtttcagcagtgtcctctccttaacataagctactgtcctcca
tcagaagttgttttggctaatggaaagagtttggtggtagttgtctacaactccctagga
tggaagagagaagaagtggtccgagttcctgtttcctcccatgaattaatcgtcctggat
tcaagtggaagagaaattgaatcacagctccttcccatattcaattcctctttgaacatg
agggactaccatgttaaagcatatcttggtaaatctccaagcactacaccccagtattgg
cttggatttacagcaaccacgccacctcttggtttcagcacgtacatcatctcaagtgca
aagcacacagatagaagttcaataatgtcaacaatgtggacatccgacagtactagtgat
aaaactgtagtagttggtggaggagatttgaagctgctttatgctacagatgagggcaag
cttacaagttatatcaataacagaaacatggttgaagaatcaatggaacactcatacagc
tactattctgggtataatggcacagatcaggcctctggagcttatatcttccgtcctaat
ggtacatttctgataaaatccgaaggggagaaagcttttactattctaaggggtccccta
atggatgaagtgcaccaacagctcaactcctggatatatcaggtcacccgtgtatacaag
gagaaggaacatgctgaagttgagtttatcattggacctatccctgtagatgatggtgtt
gggaaagaaataacaactcagatcacgactgccttcaagacgaacaagacgttctatact
gattctaatgggagagacttcattaaaagggtacgtgatttcagaacagactgggacttg
caagtgaaccaaccagttgctggaaattattacccaataaatcttggagcttatgttggg
gatggaaggatggaactgtcggtgctggtggatcgtgcggttgggggctcgagtttagta
gatggtcaaatagaactaatgctccataggaggctactatgcgatgatttgaaaggtgtt
ggagaggtgctaaatgagaccatctgtgtcctcaatgattgcaagggcttggtggtccag
ggaaaattttattttagaatcgatcccgtaggaactggagccaagtggcgtcgcacattt
ggtcaagaaatttattctccactccttctagcattttcagaacaggatgaaaatgaatgg
aaaaattctcacgtatcatccttctcaatgattgatgcatcctatagcttgccaaacaac
atagccgttataactctacaggagcttgaaagtggaaaagtacttgttcgtttggctcat
ctttacgaggtgggggaggacaaagattattctgtaatggcaaccgtggagctgaagaag
ctgtttcctaataggaagataagcaaggtgactgagatgaatctgtcgggtaatcaagaa
agaggtgagatggagaggaagaggctagcttggaaagtgaaggacttatcagaagtcaag
attgtgaggggaggtgctgttgattctgaaaagcaagtagtggaactggggcctatggaa
atccggacattcatcattgatttggattatctcgggatgtttggttcggttccaagtgat
gaatga
DBGET
integrated database retrieval system
