Cynara cardunculus var. scolymus (artichoke): 112515245
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Entry
112515245 CDS
T05604
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112515245
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
112515245
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
112515245
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
112515245
NCBI-ProteinID:
XP_024977697
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Position
LG 7:complement(7839075..7846055)
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AA seq
645 aa
AA seq
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MKIATYNVNGLRPRISQYGSLRKLLDSLDSDIICFQETKLSRQELRADAVSADGYESFFS
CTRSLEKGRTGYSGVATFCKVQSAFSSNEVALPLDAEEGFTGVLENSRGFANRKHDCVAG
VEGLEGIDRDELLKIDSEGRCIITDHGHFVLFNIYGPRAACDDAERIEFKLLFYKILQKR
WESLMLKGRRVIVVGDFNIAPSSIDRCDAGPDFENNENFNVQVKLLNIIRFRSWFRSLLV
ENGGLFNDVFRAKHPERTEAYTCWSTSTGGEVFNFGSRIDHIISAGSCLHENKDLDGHNF
FSCHVKECDILTQFKRWKPGTTPSYRWKGGRSMKLEGSDHAPVFMSLREIPDIPQHNTPS
LSTRYCPQVRGCQQTLVSMLSRRQSTEEFKAHEQSGTSLDEEIRVRGCEQLAKRPILDCN
ETGLVLDEFLTASSFVQADDVLGKDKCSQGSSSVFGGKKMLNLGSNHMKPAKCTEMKKKS
KKNQLSQLSLRSFFHSSSTANNDVKSSSADLPFEHASNSVEGYGTEILKESEFNNIDPDQ
SQCESDACNSSQTDKSKIALLEWQRIQQFMQNSIPVCKGHGEQCVSRVVKKAGPTFGRRF
YVCARAEGPASNPEANCGFFKWADSRSKHKQGKWMNGSPFAMLSS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagcaacgtataatgtgaacgggctgaggcctcgaatttctcagtatggctcc
ctccgtaaactcctggattctctcgattccgacatcatttgctttcaggaaacgaaattg
tcgagacaagaactgagagccgacgctgtttcggcagatgggtacgagtcctttttttcg
tgcacacgttctcttgaaaaaggtcgcactggttattccggtgttgcaacattttgcaaa
gtacaatctgccttttcaagcaatgaggttgcactgccacttgatgcggaggaggggttc
actggtgttctagagaactcccgaggatttgcaaatagaaaacatgattgtgtggcaggt
gtggaagggcttgaaggaattgacagagacgagcttcttaaaattgatagtgaggggcgt
tgtattatcaccgaccatggtcattttgttcttttcaacatttatgggcctcgagctgca
tgcgatgatgcagaacggattgaattcaagctcttattctacaagatactgcagaaacga
tgggagtctctcatgcttaaaggaaggagggtgatcgttgttggtgattttaacattgct
ccttcttctatagataggtgtgatgcaggaccagattttgagaacaatgagaactttaat
gttcaagttaaattattgaatattattaggtttagaagctggtttagatccttactggtg
gaaaatggaggcttgttcaatgatgtgttcagagcaaaacatcctgaaagaacagaggcc
tatacttgctggtccacgagcacaggtggtgaagtgttcaattttggttcaaggattgac
catattataagtgctggctcatgcttacatgaaaataaagatctggatggtcacaacttt
ttttcttgccatgttaaagagtgtgacatattaacacaattcaagcggtggaaacctggg
accacgccaagctacagatggaaaggagggagaagcatgaaattggaaggttcagatcat
gccccagtctttatgagtttgagagagattcctgatattccacagcataatactccctct
ttatccactagatactgtcctcaagttcgaggatgtcaacagactcttgtctcaatgtta
tcaagaaggcaatcaacagaggaatttaaagcccatgaacagtccggtacttcccttgat
gaagaaattagagtacggggctgcgagcagcttgctaagaggccaattcttgactgtaat
gaaactgggttagtcttggatgaatttcttactgcttcgagctttgtacaagcagatgat
gtattaggaaaagacaagtgctcccagggttcctccagtgtttttggtggcaagaagatg
cttaatttgggaagtaatcacatgaaaccagcaaaatgtacagaaatgaagaaaaaatcg
aaaaaaaatcaattgtcgcagctctcacttagatccttttttcacagtagttcaacagcc
aacaatgatgttaagagcagcagcgctgatctcccatttgaacatgcaagtaattctgtt
gagggatacggaactgaaattctgaaggagtctgaattcaataatattgatcctgatcag
tctcaatgtgaatcagatgcctgtaattcttcacaaactgataagagtaagattgctcta
ctagagtggcaaaggattcaacaattcatgcagaatagcatacctgtctgcaagggccat
ggtgaacaatgcgtttctcgtgttgtgaagaaagcgggacccacttttggtcgccgtttt
tatgtttgtgctcgtgcagagggacccgcctcaaatcctgaagcaaattgtggtttcttt
aagtgggctgattcaagatctaagcacaaacagggcaaatggatgaatggctctccattt
gcaatgctcagttcttga
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