Cynara cardunculus var. scolymus (artichoke): 112515288
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Entry
112515288 CDS
T05604
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112515288
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112515288
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
112515288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4
Rtf2
zf-C3HC4_3
Rota_NSP3
Prok-RING_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
112515288
NCBI-ProteinID:
XP_024977776
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All DBs
Position
LG 7:5881158..5891991
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AA seq
387 aa
AA seq
DB search
MDLNNIKDAFDRVTKKQKVSSSKSQEVVEQMSQEIEQALSGIQSATNSTFPQPDHNLILT
ELKAKLKEIAPLGQLEGTQKELNLALSKYIKLLEKHFNPDISRSYRNVDFDLHTINQIIA
SHFYREGMFDIGDCFVNEAHEESVVDRKTHFLEMYQILESMKSRDLGPALKWATTNHEKL
RQNGSDIELKLHRLQFMEILQHGRRDEALKYARAYFSPFANQHLPEIQKLMACLLWAGKL
ESSPYSELLSPTHWAKLAHELAQQFCNLLGESYQSPLSVTIAAGVQGLPTLLKLMNVMNG
KKNEWQSMKQLPVPIDIDQEFQFHSIFVCPVSRDQASEENPPMLMSCGHVLCKQSITKLS
KNNSTRPFKCPYCPTEVEVGQCRRLYF
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaataacatcaaggatgcatttgatcgcgttacaaagaagcaaaaggtgtca
tcctctaaatcccaagaggtggtcgagcaaatgagccaagaaatcgagcaggcgttatca
ggaatacaatcagccaccaacagtacttttccgcaacccgaccacaacttaatcctcacc
gaactgaaagcaaaattaaaggagatcgctccacttggtcagctagaaggtacacaaaag
gaactaaatcttgctttgagcaagtacattaagcttctcgagaaacacttcaatcccgat
atatcaagatcgtatagaaacgttgactttgacctccacacaatcaaccagataatcgcc
agtcacttttaccgtgaaggcatgtttgatatcggtgattgctttgtaaatgaagcccac
gaagaatctgttgtggaccggaaaactcacttcctagagatgtatcaaatacttgagtcc
atgaagtctcgagacttgggtcccgctttaaagtgggccaccaccaaccacgagaagctc
cgacaaaacggatccgacatcgaactcaaactccaccgtcttcaattcatggagatactt
caacatggccgtagagatgaagctctcaagtacgcccgagcttatttctcccctttcgct
aaccaacatctccccgaaatccagaagctaatggcgtgtcttttatgggccggaaagctt
gaatcctctccgtattctgagcttctatcaccaacccattgggccaagctggcccatgag
ctggcccaacagttttgcaacctcttgggtgaatcctaccaaagcccgttaagcgtaacc
atagctgctggagttcaaggcttaccaacccttttgaagctaatgaacgtgatgaacgga
aagaagaacgaatggcagtcgatgaagcagttaccggtaccgatcgacattgatcaggag
tttcagtttcactccatattcgtgtgcccggtgagccgtgatcaggcaagcgaagaaaac
ccgccgatgctgatgtcatgtggtcacgtgctttgcaaacaatcgattacaaagttgtcg
aaaaacaacagcacgaggcctttcaaatgtccgtactgcccaacggaggtggaagtgggt
caatgcaggcggttgtacttttga
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