Cynara cardunculus var. scolymus (artichoke): 112515312
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Entry
112515312 CDS
T05604
Name
(RefSeq) chloride channel protein CLC-b-like
KO
K05016
chloride channel 7
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccav01009
]
112515312
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112515312
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112515312
Protein phosphatases and associated proteins [BR:
ccav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112515312
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
112515312
Ion channels [BR:
ccav04040
]
Chloride channels
Chloride channel (CLC)
112515312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
112515312
NCBI-ProteinID:
XP_024977819
LinkDB
All DBs
Position
LG 7:149977..153598
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AA seq
783 aa
AA seq
DB search
MEKDSDQLAETTCNMEQQTNQQERDPESNSLHRPLLKRNLTLSSSPLALVGTKVSYIESL
DYEINENDLFKHDWRSRSQTQVLQYIFLKWLLAFLVGLLTGVVATLINLAVENIAGYKLL
AVVHYIEKKRYMMGFFFMTGVNFMLTLGATLLVVFLAPTAAGPGIPEIKAYLNGVDTPNM
YGAMPMFVKIIGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGPDNYRIRWRCIRYFNN
DRDRRDIITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAF
MEYCKAGDCGLFGQGGLIMFDVSGVSVRYHVVDLIPVTVIGIIGGVLGSLYNHLLHKVLR
LYNLINDKGKFAKIMLSLAVSLFTSACLYGLPFLASCTPCDPSLVDSECPSTGRMGNFKQ
FNCPKGHYNDLATLLLTTNDDAVRNIFSTNTPSEYRVFSLVIFFLLYCILGLFTFGIAVP
SGLFLPIILIGSAYGRLLGMAMGPYTTIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELT
NNLLLLPITMLVLLISKSVGDCFNPSIYEIILDLKGLPFLEAHPEPWMRNITVGELADVK
PPVVTLCGIEKVSNIVDVLRNTSHNAFAVVDNQVVPAVGQVSEVHGLVLRAHLLLVLKKK
WFLQERRRTEEWEVREKFTWVDVAERWGTIEDVAVTKEEMEMYVDLHPLTNTTPYTVVET
MSVAKALVQFRQVGLRHMLILPKYHGPTVPPVVGILTRQDLRAHNILSAFPHLERSHASK
KGR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagattcagaccaattggcagagactacctgcaacatggaacaacagacaaat
caacaagaaagagacccagagagcaattctctccatcgacccctcctcaagagaaatcta
accctttcttcaagtccactagcgctcgttggcaccaaagtttcctacatcgaaagcttg
gattacgaaatcaatgagaatgatctcttcaagcatgactggagaagcagatcacaaaca
caggtgttgcagtatatattcctgaaatggctattagccttcctggttgggcttttaacg
ggtgttgtagccactctcatcaatcttgcagttgagaacattgcaggatacaaactactg
gctgtagtccactacatagagaaaaagaggtacatgatggggttcttcttcatgaccggt
gtcaatttcatgttgacactgggtgcaactcttcttgttgtgtttttagcacctactgca
gctgggcctggcattcctgaaattaaagcttacctgaatggggtagacacgcccaacatg
tatggagccatgccgatgtttgttaagataattggaagcataggagctgtagcagcaggc
ctggacctagggaaagaagggcctttggttcacattggcgcctgcattgcttcattacta
ggtcaaggtggacccgacaattaccggatcagatggcgctgcatccgttacttcaacaat
gatcgtgatcgacgagatatcatcacttgtggagcctcctcaggggtatgtgctgctttt
cggtctcctgtgggaggtgtcttgtttgcacttgaggaggttgcaacatggtggagaagt
gctcttctctggagaacttttttcagcacagcagttgtggtggttgtgcttagagctttc
atggagtactgcaaagccggagactgcggactctttggacaaggtgggctaatcatgttt
gacgtcagtggcgtttcagtgaggtaccatgttgttgatctcatccctgtcaccgtaatt
ggaatcatcggaggagttttaggaagcctttacaaccacctccttcacaaggtccttcgt
ctctacaatctcattaatgacaaagggaaattcgccaaaattatgctcagtctcgctgtc
tcactcttcacctctgcatgcttatatggactcccattcctcgccagctgcactccgtgc
gatccatctcttgtagattccgagtgtccatctacaggaaggatggggaacttcaaacag
tttaactgcccgaaaggacactacaacgacctagcgacgctcctccttactaccaatgat
gatgctgtacgcaacatcttctccaccaacactcccagtgaataccgcgtattttcccta
gtcattttctttctactttattgcatattgggactcttcacgttcggcattgcagttccc
tccggtctcttcctccctatcatcctcataggctcagcttacggccggttgcttggtatg
gcaatggggccctatacaaccattgaccaaggtctatatgctgttttaggtgcggcttcc
ttgatggcaggctcaatgaggatgacagtttccctttgtgtaatatttcttgagttaacc
aacaatcttcttttgctccccataacaatgttagtccttctaatatccaaaagtgttggg
gactgcttcaatccaagcatctatgagatcatattagatcttaaagggttacctttcttg
gaagcccaccctgagccatggatgagaaatataactgttggtgaactagcggacgtgaag
cctccagtagtcaccctctgtggaattgagaaagtgagcaacatagtggatgttttgaga
aacacgagccacaatgcttttgctgttgtagacaatcaagtggtgccggcagtgggtcag
gtaagtgaagtgcatggacttgttttaagagctcaccttttactagtgctaaagaagaaa
tggttcctgcaagagaggaggagaacagaggagtgggaagttcgagaaaaatttacgtgg
gttgatgtggcggaaaggtggggaacgattgaggatgtggcggtcacaaaagaagaaatg
gaaatgtatgtggatttgcatccacttaccaacaccactccgtatacagtggtggagacc
atgtctgttgccaaggctttggtgcaattcaggcaggtgggactccgccacatgctcatc
ttaccaaagtaccatggccctacagtgccgccggtggttggaatcttgacgaggcaggac
ttgagagcccataacattttgagtgcatttcctcatctggaaagatcccatgcaagtaaa
aagggacgctga
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