Cynara cardunculus var. scolymus (artichoke): 112515376
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Entry
112515376 CDS
T05604
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112515376
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112515376
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
112515376
NCBI-ProteinID:
XP_024977928
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Position
LG 7:1910831..1916740
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AA seq
550 aa
AA seq
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MAGQRNSHGKRSHSQSDYNDHGRSKRRTNSDDRGQNSIGSDDTVYRYLCPGRKIGSIMGR
GGDIVKQLRSESKAKIRIGETVSGCDERVVTIHSTSEETNDFDGPDDRVCPAMDALFKVH
DRVVADDLTAEEDSEETPQVTVRLLVPSDQIGCIIGKGGQIVQTIRTDTGAQIRIMKDNH
LPACALSSDELVQISGEASIVRKALFQIATRLHDNPSRSQHLLASSTPNAYPSGGSIMGA
AAGAPIMGLTPLVGAYGGYKGESGEWPRGFYPGPRDDASPKEFSLRLICPTANIGGVIGK
GGAIINQIRQETGAAIKVDSSATEADDCIISISAKEVFEDTFSPAIEAALRLQPRCSERV
ERDSGLISFTTRLLVPTSRIGCLIGKGGAIITEIRRATKANIRILSKENLPKVAEDDDEM
VQISAELDLAKDALLQVTSRLRANLFEREGAMSTFVPVLPYLPVAPDVPDVPKYENRDSK
GHGRVHSYSGGYNASTDLPANDGYGSYGGLQGRSGGDAYGAYGGGYSSGRSGSSGLSRHN
PVSRRRDYGY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcaaagaaatagtcatggaaagcgttcgcattctcaatctgactacaatgat
catggaagaagcaagagacggactaacagcgatgacagaggacagaattctattggttca
gatgatacggtgtaccgctacttatgtcctggtaggaagattggaagtataatgggaagg
ggtggggatattgttaagcaactgagatctgagagtaaggcaaaaattagaattggtgag
acggtgtcgggatgtgatgaacgtgttgtcactatccacagcacgagtgaggaaacaaat
gattttgatggccctgatgatcgtgtgtgtccagcaatggatgctcttttcaaagtgcat
gatagagttgttgctgatgacctaactgctgaagaggattccgaggaaacaccgcaagtt
actgttcgactccttgtaccatcagatcagattggatgtattattggaaaaggtggacag
atagttcaaactatacggactgacactggggctcagattcgaattatgaaggataatcat
ctgcctgcttgtgcattaagtagcgatgaacttgtgcagatatctggtgaagcctctatt
gtgagaaaagcactcttccaaattgcaactcgtcttcacgataacccatcacggtcacag
cacttgcttgcttcctccacacctaatgcttatccttctggtggttctattatgggtgca
gctgctggtgcaccgattatgggtttgactccactggttggtgcttatggtgggtacaag
ggtgaaagcggggagtggccacgtggcttctatccaggtccaagggatgatgcttcaccg
aaggaattttctcttcgtttgatttgccctactgcaaacattggtggtgtaattggcaag
ggtggtgctataattaatcaaattagacaggaaactggagcagccatcaaagttgatagt
tcagcgaccgaggcagatgattgcataatatctatttcagcgaaagaggtatttgaagac
acattttctccagctattgaggcggcattacgcctgcaacccaggtgtagtgagagagtt
gaacgagattcaggtcttatttcttttactactagattgcttgtgccaacctctcggatt
gggtgccttattgggaaaggaggagcaataatcacagaaatcaggagagctaccaaagct
aacattcgcattctttcaaaggagaaccttccaaaagttgccgaggatgatgatgagatg
gtacagatttcagcagaacttgatctcgccaaagacgcactcttacaagtaacctcacga
ttgagggcaaatctttttgaaagagaaggcgcaatgtctacttttgttccagttcttcca
taccttcctgtggcacctgatgtgcctgatgttccaaagtatgagaatagagattctaaa
ggtcatggacgagtacattcttattctggtggatataatgcatctactgacttgccagct
aatgatggatatggaagctatggtggattgcaggggcgaagtggtggtgatgcttatgga
gcctatggtggtggctattcttctggacgcagtgggagttctgggttgtcgaggcataac
cctgtttctaggcggagggattatgggtattga
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