Cynara cardunculus var. scolymus (artichoke): 112515417
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Entry
112515417 CDS
T05604
Name
(RefSeq) CSC1-like protein HYP1 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112515417
Transporters [BR:
ccav02000
]
Other transporters
Pores ion channels [TC:
1
]
112515417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
112515417
NCBI-ProteinID:
XP_024977985
LinkDB
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Position
LG_7
Genome browser
AA seq
739 aa
AA seq
DB search
MILSALLTSVGINLGLCFLFFTLYSILRKQPGNADVYAPRLVAEGKSDQRNDFNLERLLP
STSWVKRSWNPSEQELLVRAGLDGVVFMRIIIFSLKVFAFAGVLGLCVLLPINYMGSQIV
IDFSDITNMSLESFMISNVNDGSKRLWVHFSAVYVFTAFVCYLLYVEYSYISAKRLAFFY
SSKPKPDQFTVLVRGTPKSSTDSFSGSVEKFFTEYYPTLYLSHYMVYHTTKIQKLISDAE
KVHRKLALLKSTQPTSKRFGRVGFLGIFGPKVDLLEYYEKKLEELEDNVRMQQSLLSGKE
TSAAFVSFKSRLGAAIALHIQQGENPTEWLTEQAPEPQDIYWPFFSASFISIWIGNVVVV
VACIALTLLFFVPVILVQSLTHLDQLETWFPFLKGVLQITFVSQVITGYLPSLILKLFLY
FVPPVMTMLSCLQGYVAHSQIEKSASNKMLWFTIWNVFFVTSLSGSVLYQVHMFWEPKEI
PNILAVAVPAQATFFITYVVTSGWTSTASELFRLMPLISSFTRRNILTKTGEQFEVPSVP
YSSELPNILLFGLLGITYFFLSPLILPFLLVYYCLAYIIYRHQLLDVYSPKFETAGMFWP
IVHNSTVFSLVLMHLIAVGIFGLKKIPLAASLTIPLPIITLLFNGYCRKRFLPVFKGYPA
ERPFISGQKLTSVEWALDGYRFSQSVRVSRVVDLQVSRIEQNDKAILTCISCSESDPCIG
FGRCSSSKDVILPPGFVVS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgattctttctgctcttttgacttccgttggaataaatcttggtttatgtttcctattc
ttcactctatactccatattgaggaagcaaccaggtaatgcagatgtttatgcaccacgc
ttggttgccgaaggaaaatctgaccagagaaacgatttcaacttggaaaggttactgcct
tctaccagttgggttaagaggtcatggaatccctccgaacaagaacttctcgtgcgtgcg
ggtttagatggtgtcgtctttatgcgcattattatcttcagtttgaaagtatttgctttt
gctggggtacttggcctttgtgttcttctaccaatcaattatatgggaagtcagatcgtg
attgatttttctgacatcacaaacatgtctcttgaatcattcatgatttcaaatgtcaat
gatggttcgaaaaggttatgggttcacttcagtgcggtatatgtcttcactgcatttgtc
tgctatcttctttatgttgagtatagttatatctctgcgaaaaggcttgccttcttctac
tcatccaagccaaagccggatcaatttactgtattggttcggggtaccccaaaatcgtcc
acagacagctttagtggaagtgttgagaaatttttcacagagtattatccaacactatat
ctgtcacattacatggtgtatcacactacaaagattcagaagctaattagtgatgctgag
aaggtgcatagaaagcttgctcttctgaagtcgacacagccaacttcaaaaaggtttgga
cgtgttggatttttggggatttttggtcccaaagttgatctcttggagtattatgaaaag
aagttagaagagctagaagataatgtgaggatgcaacagtcattacttagtgggaaggaa
acttctgctgcttttgtatctttcaagtcacggcttggtgctgcaatagctttacacatc
caacaaggagaaaatcctacagagtggctaaccgagcaggctccagagccccaggatata
tactggcccttcttttctgcgtcattcataagtatatggattgggaatgtcgtggtggtt
gttgcatgtattgctcttacacttttgttcttcgtacctgtaatcctagtgcagagtctc
actcatttggaccaactggagacctggttcccttttctgaaaggtgtactgcaaataacg
ttcgtaagtcaggtcatcacaggatatctccctagtctgattctcaagctgtttttgtat
tttgtgccacctgtcatgacaatgttatcctgtctccaaggctatgttgcacacagtcag
atagagaaaagtgcatctaacaagatgctatggttcaccatatggaacgtattcttcgta
acctctttgtcgggatcagttttatatcaggtccatatgttttgggagcctaaggaaata
ccaaatatattagcagttgccgttccagcacaggctacattcttcatcacatatgtcgtg
acatctggctggaccagtacagcttcagagctttttcgcttgatgcccctcatttccagt
ttcacgagaagaaatatactcacaaaaactggtgaacaatttgaagtgccttcagttcct
tacagcagtgagctccccaacattctcttatttggacttctgggcattacctactttttc
ctgtcgcccttaattctgccgtttctattggtttactactgtctggcatacataatttat
cgtcaccagttgctcgatgtctattcaccgaaatttgagactgcaggaatgttttggccg
attgtgcacaattcaacagttttttcgttggtattgatgcacttaattgctgtggggata
tttggtctgaagaaaattcccctggctgccagtttgactattccactccccatcatcact
cttctgtttaacggctactgccgaaagcgattcctaccagttttcaagggctatcctgct
gagcggccttttataagtggacaaaaacttacgagtgtcgagtgggcactagacgggtat
agattttcccaaagcgttcgagtttctagagtggtagaccttcaagtaagtcgaatcgaa
cagaatgacaaagctatattgacttgcatctcctgcagtgaaagtgatccttgcatcggg
tttggtcgttgcagctcttcaaaagatgtcatattgccccctggctttgtagtctcttag
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