Cynara cardunculus var. scolymus (artichoke): 112515544
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Entry
112515544 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112515544 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112515544
Enzymes [BR:
ccav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
112515544
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
112515544
Prokaryotic type
112515544
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
112515544
NCBI-ProteinID:
XP_024978188
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All DBs
Position
LG 7:409784..416796
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AA seq
531 aa
AA seq
DB search
MAKLNCITRASSLVFFHPRPILSFRTQLLCKPFISQSIYSYSTTKTPFPLQYEMIISRPP
QTPNLHHPRRRRPPPPLPNSKPSDSDPNSQLGFDDWVDMKLTSESAHGSSTQNQDIKQPM
FLNEEMDRSKRKYYNKRQKRMYGSDSEDDDGKHENKYIELNQEVVKLRTLHKREEELYFY
DAFAYPWEKDKHYKMVYQLEKKFFPDQCFDKAFLEPGQSNGIMEEEKKKRVAVKNGGLKK
DEKRLVFFEEEKELKDEDGKKDVKMDITEKKVEEFFKCLKKVPNEKNEVDNTLPFISGRS
SGLPPKWDGPTGAVLLVNKPKGWTSFTVCGKLRRLVNVKKVGHAGTLDPMATGLLIVCIG
KATKLVDRFQGMDKGYSGVLRLGEATSTLDADSPVIQREPWEHIKDDDIKKTAASFCGEI
WQVPPMFSAIKVGGERLYEKARRGESIELSPRRISIFQFDVERSLEDRQNVVFRVTCSKG
TYIRSLCADFAKALNSCAHMTALRRDSIGEYSVDDAWEFTDLEREIPKSYI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaattaaattgcataacccgtgcatcatctctcgttttcttccatcctcgacca
atcttatcttttcgtacacaactactctgcaagcctttcatatcacaatctatatattca
tattccaccaccaaaactccatttccacttcaatacgaaatgataatctcccgcccacct
caaactccgaacctccaccatcctcgccgccggagaccaccaccaccactcccgaattcg
aaaccatccgactccgacccaaattcccaattgggcttcgatgattgggttgatatgaaa
ttaacttcagaatcagcacatggatcatccacacaaaatcaagatataaagcaacctatg
tttttgaatgaagagatggatagatcaaagaggaagtattacaacaagaggcaaaagagg
atgtatggttcggattcagaagatgacgatggtaagcatgaaaacaagtatatagagtta
aatcaagaagttgttaagctacgcacattgcataaaagagaagaggaattatatttctat
gatgcttttgcatatccatgggaaaaggataagcattataagatggtgtatcagttggag
aagaagttttttcctgatcaatgttttgataaggcgtttcttgaaccaggtcaatcgaat
ggaattatggaggaggagaagaagaagagggttgctgttaaaaatggtgggttgaagaaa
gatgagaagagattggtgttttttgaggaggaaaaggaattgaaggatgaagatgggaag
aaagatgtgaaaatggacattacagagaagaaagttgaggagttcttcaagtgtttgaag
aaagtccctaatgaaaaaaatgaagttgataacacactaccattcatatcgggtaggagt
tccgggcttcctcctaaatgggatggtccaactggagctgttcttttggtcaataaacca
aaaggatggacttcatttacggtttgtgggaagttgcgccgcctggtcaatgttaagaag
gttgggcatgcagggacccttgatcctatggcaactggtttgcttattgtatgtattggc
aaagcaacaaagttggttgatagatttcagggtatggataaaggttatagcggagtcctt
cgtttaggcgaagctacctcaactctagatgctgactcaccggtaatacaacgtgagcca
tgggagcacatcaaggatgatgacataaagaaaaccgctgcatcattttgtggggaaata
tggcaagttcctccaatgttctcggccattaaagttggaggtgagaggctatatgagaaa
gcaagaagaggagaaagtatcgaactttcaccaagacggatatcaattttccagtttgat
gttgagcgaagtcttgaagacagacaaaatgtggttttcagggtgacatgctcaaaaggg
acgtatatccgatccctatgtgcagattttgccaaggctctcaacagctgtgctcatatg
actgctctacgaagagattccattggggaatactcagtagatgatgcatgggaattcaca
gacttagaaagagaaatccccaaaagttatatatag
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