Cynara cardunculus var. scolymus (artichoke): 112515778
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Entry
112515778 CDS
T05604
Name
(RefSeq) transcription factor MYB30-like
KO
K09422
transcription factor MYB, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112515778
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112515778
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Myb_DNA-bind_7
Herpes_U44
NPR1_like_C
Motif
Other DBs
NCBI-GeneID:
112515778
NCBI-ProteinID:
XP_024978476
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All DBs
Position
LG 1:12826548..12827932
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AA seq
315 aa
AA seq
DB search
MGRPPCCDKMVVKKGPWTPEEDIMLVSYVQRHGPGNWRQVPTNTGLRRCSKSCRLRWTNY
LRPGIRRGDFTHDEETMIIQLQALLGNKWSAIASYLPERTDNDIKNHWNTHLKNKLRKLY
DHDHDRIPSSSTSSSSSSSHHISRGQWEKRLQTDVHMAKQALSDALSLDKPSIFLDNFPA
PQPTSSYNTSTQTTTYASSTGNIANLLKGFMKNAPISSKSSSDSSTCKTTGIDSSEGFES
LLGFDQSFGSPNGSDLSLSNMSPKESKPELIGAQLPFTMFENWLLDEAGGDDVINQRKTD
LTHFAFDQNPDHFRN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggagaccaccatgctgtgacaaaatggtagtgaagaaagggccatggactcctgag
gaagatataatgctcgtctcttatgttcaacgccatggccctggcaattggcgccaagtc
ccaaccaacaccggactgcgtagatgcagtaagagctgtaggctaaggtggacaaattac
cttaggcctggtatcagaaggggagatttcacccatgatgaggaaaccatgatcatccag
ctacaagctcttttgggtaacaaatggtcagcgatagcttcatatctccctgagagaaca
gataacgacattaaaaaccactggaatacccatttgaaaaacaagcttagaaagctctat
gatcatgaccatgatcggattccatcttcttcaacatcatcatcatcatcttcctcccac
catatctccaggggtcagtgggagaagaggcttcaaactgatgttcacatggccaaacaa
gcactgagtgatgctttatctttagacaaaccatccatctttcttgataactttcctgct
cctcaacctacttcttcttataatacctctacccaaacaaccacttatgcttctagcacc
ggcaacatagcaaatctgctcaaagggttcatgaaaaacgcacccatcagttcaaaatca
agttcagattctagcacttgcaagactactgggattgattcatccgaagggtttgaatct
ttgcttggttttgatcagtcttttgggtctccaaatggttcagatctttccctatcaaac
atgtcgccaaaagaaagcaagccggagttaattggtgcccaactgccattcacaatgttt
gaaaactggttgcttgatgaagccggtggtgatgatgtgattaatcaaaggaaaacagat
ttaactcatttcgcgtttgatcaaaacccagatcattttcgcaactga
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